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. Author manuscript; available in PMC: 2008 Nov 1.
Published in final edited form as: J Mol Graph Model. 2007 Jul 14;26(4):800–812. doi: 10.1016/j.jmgm.2007.07.003

Table 1.

Decomposition of total intermolecular interaction energies (kcal/mol) between ligand and rMrgA receptor, calculated for the residues within 5 Å of the ligand.

Ligand Coulomb VDW Hbonds TOTAL
Adenine −2.37 (100) −11.63 (100) −28.17 (100) −42.17 (100)
1MA −1.20 (50) −16.16 (138) −23.87 (84) −41.23 (97)
6BAP −0.35 (14) −29.90 (257) −12.58 (44) −42.82 (101)
HPX −3.06 (129) −12.64 (108) −13.95 (49) −29.65 (70)
Guanine −3.27 (137) −14.26 (122) −16.59 (58) −34.12 (80)
Adenosine −1.23 (51) −22.84 (196) −12.95 (45) −37.02 (87)

The numbers in parentheses are percentages of interaction energies relative to that for adenine.