Table 1.
Name | Nucleotide positions* | Sequence |
---|---|---|
For the N gene fragments | ||
91-84 | 2766–2744 | 5′-AGCTAATCTAGAACCATGGATGACTCACTAAGGAAAGCATTGTTGC |
93-89 | 2669–2650 | 5′-TACAGTTCTAGAACCATGGTCTGGAAAACCTTGACCAG |
93-85 | 2576–2556 | 5′-TACAGTTCTAGAACCATGGTAAAGCGATTTTACTTTTGGTA |
92-55 | 2373–2354 | 5′-AGATTCTCTAGACCATGGTGACTTGATGAGCAAAGTCTGTGAGGCTTGC |
93-91 | 2266–2248 | 5′-TACAGTTCTAGAACCATGGAAAATACAAGGATCTCGGG |
93-87 | 2153–2133 | 5′-TACAGTTCTAGAACCATGGTAGAAGGGGAAAGAGTATGCTG |
90-47 | 1918–1937 | 5′-AGCATTGGATCCATGGTTAACACACTAAGCAAGCAC |
93-86 | 2158–2177 | 5′-TCTTGAGGATCCATGGCTGATCTTCATTCATTTCAA |
93-90 | 2269–2288 | 5′-TCTTGAGGATCCATGGATCCTGATATATAGCCAAGA |
92-53 | 2383–2402 | 5′-TACAGTGGATCCATGGTTAAGGTAATCCATAGGCTTGAC |
93-84 | 2577–2597 | 5′-TCTTGAGGATCCATGGCTTAATAACCTTCATTATGC |
93-88 | 2671–2690 | 5′-TCTTGAGGATCCATGGAAAAGTCTTGAAGTTGAATG |
94-265 | 2556–2530 | 5′-AGCTAATCTAGAACCATGGATGAAAAATTACCATAAAGAAAACTTCAGAC |
94-266 | 2182–2206 | 5′-AGCATTGGATCCATGGTTAGTTACCTAGTTTTCTTTTCAGCACAGTGCAAACT |
For the GFP gene | ||
5′ GFP | NA | 5′-TGAACATCTAGAACCATGGGTAAAGGAGAAGAACTTTTCACTGG |
3′ GFP | NA | 5′-TGAACAGGATCCATGGTCTACGAATGCTATTATTTGTATAGTTC |
NA, not applicable.
Nucleotide position number of each primer for the N gene segments was as published by Pang et al. (33). The N gene and GFP gene sequences are underlined and the rest of the sequences correspond to the primers used for cloning. Out-of-frame ATG and stop codons for the untranslatable versions in the 5′ primers are shown in boldface.