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. 2007 Sep 21;73(22):7435–7442. doi: 10.1128/AEM.01143-07

TABLE 3.

Quantitation of bacterial populations in the terminal ileum and different regions of the large intestine using real-time PCR

Organism Log10 16S rRNA gene copies/mg mucosal tissuee
Terminal ileum (n = 6)
Ascending colon (n = 8)
Transverse colon (n = 8)
Descending colon (n = 4)
Range Mean SD Range Mean SD Range Mean SD Range Mean SD
Total eubacteria 7.9-9.5 9.1a,b,c 0.6 6.8-7.9 7.4a 0.4 6.9-8.0 7.3b 0.4 6.9-8.1 7.5c 0.5
Bacteroides 5.8-6.4 6.0 0.2 6.1-6.4 6.3 0.1 6.1-6.7 6.3 0.2 6.1-6.4 6.3 0.1
Bifidobacteria 4.4-4.8 4.7a 0.2 4.9-5.9 5.3a 0.4 4.4-5.4 4.9 0.3 4.7-6.2 5.2 0.7
Desulfovibrios 4.0-4.6 4.3 0.2 3.8-4.6 4.2 0.3 3.8-6.1 4.3 0.8 3.6-5.1 4.3 0.6
Lactobacilli 2.7-6.4 5.2a 1.5 2.8-5.7 4.5a,d 1.2 5.0-6.2 5.7 0.4 5.7-6.2 6.0d 0.2
Enterobacteria 4.1-7.4 5.7 1.3 5.1-6.6 5.5 0.5 4.3-6.5 5.7 0.7 4.5-6.2 5.4 0.8
Peptostreptococcus anaerobius 3.8-6.4 4.8 1.0 3.0-6.5 4.0 1.1 2.9-5.8 3.9 0.9 3.4-4.2 3.7 0.4
Clostridium clostridioforme 6.1-6.5 6.2 0.2 6.1-6.7 6.4 0.2 6.0-6.5 6.2 0.2 6.0-7.2 6.5 0.5
Clostridium butyricum 0-3.6 2.2 1.7 2.7-3.2 2.9 0.2 0-3.4 2.0 1.6 0-3.3 1.5 1.7
Eubacterium rectale 4.2-7.1 5.7 1.1 5.8-7.1 6.5d 0.4 4.2-6.4 5.4 0.8 5.0-7.4 6.0d 1.1
Faecalibacterium prausnitzii 3.7-5.6 4.7a 0.7 5.2-6.6 6.0a 0.6 3.9-6.4 5.2 0.9 4.3-7.4 6.0 1.3
Enterococcus faecalis 0-4.2 2.6a,b 2.0 4.0-4.7 4.3a 0.2 4.1-5.1 4.5b 0.3 0-4.5 3.2 2.2
a

A significant difference (P < 0.5) was found between populations in the terminal ileum and proximal colon.

b

A significant difference (P < 0.5) was found between populations in the terminal ileum and transverse colon.

c

A significant difference (P < 0.5) was found between populations in the terminal ileum and distal colon.

d

A significant difference (P < 0.5) was found between populations in the proximal and distal colon.

e

No significant differences were found between populations in the proximal and transverse colon or between populations in the transverse and distal colon.