TABLE 3.
Performance of individual and nested primer pairs in the corresponding multiplex nested PCR assay group
| Organism | Detection limit (copy no. of nucleic acids)
|
||
|---|---|---|---|
| Outer primera | Inner primera | Nested PCRb | |
| Group 1 | |||
| Influenza A virus | 1 | 1 | 1 |
| Influenza A virus H1 | 106 | 106 | 102 |
| Influenza A virus H3 | 103 | 104 | 10 |
| Influenza A virus H5 | 106 | 106 | 1 |
| Influenza B virus | 1 | 10 | 1 |
| Group 2 | |||
| PIV-1 | 106 | 106 | 1 |
| PIV-2 | 108 | 106 | 1 |
| PIV-3 | 1010 | 106 | 1 |
| PIV-4a,b | 108 | 1010 | 1 |
| Group 3 | |||
| hRSV A | 102 | 102 | 1 |
| hRSV B | 104 | 106 | 10 |
| hRV | 1 | 1 | 1 |
| hEV | 106 | 108 | 104 |
| Group 4 | |||
| HCoV-OC43 | 106 | 104 | 10 |
| SARS-CoV | 102 | 106 | 1 |
| HCoV-229E | 106 | 102 | 1 |
| hMPV | 102 | 102 | 1 |
| Group 5 | |||
| M. pneumoniae | 1 | 1 | 1 |
| C. pneumoniae | 104 | 1 | 1 |
| L. pneumophila | 102 | 1 | 1 |
| ADV (A to F) | 108 | 1010 | 1 |
The detection limits of outer and inner primers were tested in the form of multiplex primer mix.
The PCR products from the first-round PCR are used as a template for the second-round PCR in the nested PCR limit detection test.