TABLE 1.
Bacterial strains and sources used for the genomic comparison of S. pneumoniae strains
Strain name | Sequence source | Serotype | Source | MLST type |
---|---|---|---|---|
CGSSp11BS70 | CGS | 11 | Pittsburgh, PA | 62 |
CGSSp14BS69 | CGS | 14 | Pittsburgh, PA | 124 |
CGSSp18BS74 | CGS | 6 | Pittsburgh, PA | New |
CGSSp19BS75 | CGS | 19 | Pittsburgh, PA | 485 |
CGSSp23BS72 | CGS | 23 | Pittsburgh, PA | 37 |
CGSSp3BS71 | CGS | 3 | Pittsburgh, PA | 180 |
CGSSp6BS73 | CGS | 6 | Pittsburgh, PA | 460 |
CGSSp9BS68 | CGS | 9 | Pittsburgh, PA | 1269 |
D39 | TIGR | 2 | United States | |
R6 | Eli Lilly and Company | No capsule | Derivative of D39 | |
23F | Sanger | 23 | Spanish pandemic | |
INV104B | Sanger | 1 | Oxford, United Kingdom | |
INV200 | Sanger | 14 | Oxford, United Kingdom | |
OXC141 | Sanger | 3 | Oxford, United Kingdom | |
TIGR4 | TIGR | 4 | Norway | |
TIGR670-6B | TIGR | 6B | Spain | |
PAT6420135 (ATCC 55840) | Human Genome Sciences, Inc. | Unknown | Unknown |