TABLE 2.
Levels of polymorphisms between tandem repeats of hypermutable human minisatellitesa
Locus | Reference | Male mutation rate (%) | Array length (bp) | No. of SNPs | Polymorphism level (%) |
---|---|---|---|---|---|
CEB1 | 37 | 12.9 | 38-42 | 8 | 19-21 |
B6.7 | 23 | 7.6 | 33-34 | 4 | 12 |
MS1 | 41 | 5.3 | 9 | 1 | 11 |
MS32 | 41 | 1.2 | 29 | 2 | 7 |
MS31A | 41 | 0.75 | 20 | 2 | 10 |
plg3 | 33 | 0.65 | 36 | 2 | 5.5 |
The average mutation rate is provided together with the array length (minimum to maximum), the number of SNPs between various repeats, and the percentage of polymorphisms. Note that the polymorphism level for most loci is above the 7% level observed at HS22.