TABLE 5.
Deduced fusion cleavage site amino acid motifs (positions 110 to 117) for NDV isolates from WS and LBM samples by class and genotype (n = 290)
Fusion cleavage site motif | No. of isolatesa
|
||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Class I genotype:
|
Class II genotype
|
Total | |||||||||||
1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | I | Ia | IIa | ||
EGERQERL | 5* | 5 | |||||||||||
GGEQQERL | 6* | 6 | |||||||||||
GGERQDRL | 16 | 1 | 17 | ||||||||||
GGERQERL | 12 | 11 | 10* | 13 | 59 | 1 | 46 | 6 (1*) | 24 | 183 | |||
GGERQGRL | 1 | 1 | |||||||||||
GGVRQERL | 2 | 2 | |||||||||||
EGGKQGRL | 4 | 4 | |||||||||||
GGEKQGRL | 46 | 46 | |||||||||||
GGGKQGRL | 8 | 5 | 8 | 21 | |||||||||
GVEKQGRL | 1 | 1 | |||||||||||
RGGKQGRL | 4 | 4 | |||||||||||
Total | 12 | 11 | 21* | 13 | 75 | 2 | 49 | 6 (1*) | 24 | 8 | 9 | 59 | 290 |
Asterisks denote non-U.S. isolates.