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. Author manuscript; available in PMC: 2008 Nov 9.
Published in final edited form as: Mol Cell. 2007 Nov 9;28(3):458–467. doi: 10.1016/j.molcel.2007.09.007

Table 1.

Rate constants for hydrolysis and aminolysis derived from nucleophile partitioning experiments

Kobs-HA (s−1) Fold increase (HA) Kobs-water (s−1) Fold increase (water) Fold RF defect
Solution 5.3×10−3 ± 0.7×10−3 19 2.3×10−5 2
Ribosome 2.9×10−4 ± 0.2×10−4 1.2×10−5 ± 0.4×10−5
tRNA 1.3×10−3 ± 0.3×10−3 5 5.9×10−4 ± 2.3×10−4 50
RF1 cnd 0.65 ± 0.06 53000

Ribosome Mutants
A2602C 1.8×10−4 ± 0.4×10−4 1 1.0×10−3 ± 0.3×10−3 85 620
U2585C 5.6×10−4 ± 0.3×10−4 2 8.2×10−3 ± 0.9×10−3 670 79

RF1 Mutants
G233A 3.6×10−4 ± 2.4×10−4 1 1.2×10−3 ± 0.6×10−3 97 540
G234A 2.9×10−4 ± 0.6×10−4 1 8.4×10−5 ± 2.6×10−5 7 7700
Q235W cnd 0.086 ± 0.003 7000 7
Q235K cnd 0.17 ± 0.04 14000 4
Q235E cnd 0.27 ± 0.05 22000 2
Q235N 2.1×10−5 ± 0.3×10−5 −14 8.5×10−5 ± 2.0×10−5 7 7600
Q235D 1.1×10−5 ± 0.1×10−5 −26 6.8×10−5 ± 0.4×10−5 6 9500
Q235L cnd 0.0086 ± 0.0026 700 75
Q235T cnd 0.016 ± 0.004 1300 41
Q235S 4.4×10−3 ± 0.6×10−3 15 0.068 ± 0.009 5500 10
Q235A 3.3×10−2 ± 0.5×10−2 113 0.18 ± 0.02 14000 4
Q235G 4.7×10−2 ± 0.8×10−2 165 0.021 ± 0.009 1700 30

cnd = could not determine