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. 2007 Nov 13;35(21):e146. doi: 10.1093/nar/gkm989

Table 1.

Detection of 48 alternative cassette exons from a pool of cDNAs by different RT-PCR methods

Method of PCR Flanking PCR Semi-nested PCR


Method of RT priming Oligo-dT Random hexamer Oligo-dT Random hexamer Exon specific
Number of alternatives detected 7/48 (14.6%) 20/48 (41.7%) 29/48 (60.4%) 42/48 (87.5%) 47/48 (97.9%)

Note: The sensitivity for each method is shown in parentheses.