Table 1.
UL27 nucleotide and amino acid sequence similarities between the Anlier isolate and ruminant alphaherpesviruses
| Nucleotide similarity | |||||||||||
| UL27 | BoHV-1 Lam (1.1) | BoHV-1 K22 (1.2) | BoHV-5 N569 | BuHV-1 b6 | CpHV-1 Ba-1 | CvHV-1 Banf. 82 | CvHV-2 Salla 82 | ElkHV-1 | CvHV-1 Anlier | SuHV-1 Becker | |
| Amino acid similarity | BoHV-1 Lam (1.1) | 99 | 95.9 | 96.6 | 87.8 | 94.8 | 92.3 | 94.5 | 94.8 | 75.4 | |
| BoHV-1 K22 (1.2) | 100 | 95.7 | 96.1 | 87.8 | 94.5 | 92.1 | 94.5 | 94.5 | 75.2 | ||
| BoHV-5 N569 | 97.9 | 97.9 | 98.6 | 88.5 | 96.3 | 93.6 | 95.9 | 96.1 | 76.3 | ||
| BuHV-1 b6 | 97.2 | 97.2 | 99.3 | 88.9 | 96.8 | 93.6 | 96.6 | 96.8 | 76.5 | ||
| CpHV-1 Ba-1 | 88.5 | 88.5 | 88.5 | 87.8 | 88 | 88.7 | 88.2 | 87.8 | 75.6 | ||
| CvHV-1 Banf. 82 | 94.5 | 94.5 | 95.2 | 95.9 | 87.8 | 95 | 99.3 | 99.3 | 76.5 | ||
| CvHV-2 Salla 82 | 91.8 | 91.8 | 91.8 | 91.8 | 88.5 | 94.5 | 95.2 | 94.3 | 77.7 | ||
| ElkHV-1 | 94.5 | 94.5 | 94.5 | 94.5 | 88.5 | 98.6 | 95.9 | 98.8 | 75.9 | ||
| CvHV-1 Anlier | 94.5 | 94.5 | 95.2 | 95.2 | 86.4 | 98.6 | 93.2 | 97.2 | 75.9 | ||
| SuHV-1 Becker | 70.9 | 70.9 | 70.2 | 70.2 | 71.6 | 69.5 | 70.2 | 68.9 | 68.2 | ||
Suid herpesvirus 1 (SuHV-1) Becker strain was used as an outgroup.