Table 2.
US8 nucleotide and amino acid sequence similarities between the Anlier isolate and ruminant alphaherpesviruses
| Nucleotide similarity | |||||||||||
| US8 | BoHV-1 Lam (1.1) | BoHV-1 K22 (1.2) | BoHV-5 N569 | BuHV-1 b6 | CpHV-1 Ba-1 | CvHV-1 Banf. 82 | CvHV-2 Salla 82 | ElkHV-1 | CvHV-1 Anlier | SuHV-1 Becker | |
| Amino acid similarity | BoHV-1 Lam (1.1) | 99.4 | 85.3 | 86.5 | 76.2 | 83.4 | 76.5 | 83.7 | 83.1 | 50.2 | |
| BoHV-1 K22 (1.2) | 99 | 85 | 86.6 | 76.3 | 83.6 | 76.5 | 83.9 | 83.2 | 50 | ||
| BoHV-5 N569 | 76.4 | 75.9 | 96.5 | 74.8 | 87.3 | 80.6 | 88.3 | 87 | 53.9 | ||
| BuHV-1 b6 | 78.8 | 79.8 | 92.7 | 76.8 | 89 | 80.9 | 90 | 88.8 | 54 | ||
| CpHV-1 Ba-1 | 59.7 | 60.1 | 59.3 | 61.2 | 77.8 | 76.3 | 78.6 | 77.8 | 50.2 | ||
| CvHV-1 Banf. 82 | 69.8 | 70.8 | 76.4 | 79.8 | 60.2 | 82.6 | 97.5 | 97.3 | 53.2 | ||
| CvHV-2 Salla 82 | 64.5 | 65 | 67.3 | 69.8 | 60.2 | 70.3 | 82.7 | 82.4 | 52.9 | ||
| ElkHV-1 | 69.8 | 70.8 | 77.8 | 81.2 | 61.2 | 94.2 | 70.8 | 96.2 | 53.9 | ||
| CvHV-1 Anlier | 70.3 | 71.2 | 76.4 | 80.2 | 57.8 | 95.1 | 69.8 | 92.3 | 52.4 | ||
| SuHV-1 Becker | 25 | 25 | 30.4 | 30.7 | 25.8 | 28.7 | 25.3 | 29.1 | 27.2 | ||
Suid herpesvirus 1 (SuHV-1) Becker strain was used as an outgroup.