Table 2.
Top 100 genes identified in Norwegian Landrace
| ID | Name | gene_id | M | adj.P.Val |
| 214052 | Carbonyl reductase/NADP-retinol dehydrogenase (DHRS4) | NM_214019.1 | 1.106 | 1.94e-08 |
| 213358 | Microtubule-associated protein 1 light chain 3 alpha (MAP1LC3A) | NM_032514.2 | 0.805 | 2.41e-08 |
| 210231 | Ferritin, light polypeptide (FTL) | NM_000146.3 | 0.884 | 2.49e-08 |
| 103463 | Cytochrome P450 17A1 (CYP17A1) | NM_214428.1 | 1.278 | 3.06e-08 |
| 209574 | KIAA1423 (KIAA1423) | XM_376550.2 | 0.466 | 3.06e-08 |
| 215500 | Ferritin, light polypeptide (FTL) | NM_000146.3 | 0.820 | 3.27e-08 |
| 210851 | Ferritin, light polypeptide (FTL) | NM_000146.3 | 0.910 | 4.39e-08 |
| 211570 | Similar to hypothetical protein (LOC475155) | XM_532385.1 | 0.488 | 9.99e-08 |
| 217877 | Ferritin, light polypeptide (FTL) | NM_000146.3 | 0.838 | 1.76e-07 |
| 218005 | 0.902 | 1.82e-07 | ||
| 220047 | Cell division cycle associated 7 (CDCA7), transcript variant 1 | NM_031942.3 | -0.524 | 2.21e-07 |
| 203529 | Cystatin F (leukocystatin) (CST7) | NM_003650.2 | 0.727 | 3.30e-07 |
| 211448 | Golgi phosphoprotein 3-like (GOLPH3L) | NM_018178.3 | 0.778 | 4.07e-07 |
| 213434 | Eukaryotic translation elongation factor 1 alpha 1 (EEF1A1) | NM_001402.4 | 0.884 | 4.76e-07 |
| 213869 | PRA1 domain family, member 2 (PRAF2) | NM_007213.1 | 0.258 | 1.79e-06 |
| 105119 | Steroidogenic acute regulatory protein (STAR) | NM_213755.2 | 0.378 | 1.79e-06 |
| 100252 | Ras homolog gene family, member Q (Rhoq) | NM_053522.1 | 0.330 | 4.40e-06 |
| 209883 | 0.442 | 7.35e-06 | ||
| 211898 | POU domain, class 3, transcription factor 2 (POU3F2) | NM_005604.2 | 0.541 | 7.81e-06 |
| 102025 | Cytochrome b-5 (CYB5) | NM_001001770.1 | 0.397 | 8.88e-06 |
| 209731 | Ferritin heavy-chain (FTH1) | NM_213975.1 | 0.421 | 2.15e-05 |
| 201622 | Hypothetical protein LOC285016 (LOC285016) | NM_001002919.1 | 0.602 | 2.60e-05 |
| 101322 | Ferredoxin (FDX1) | NM_214065.1 | 0.420 | 2.69e-05 |
| 206784 | Ferritin heavy-chain (FTH1) | NM_213975.1 | 0.345 | 4.90e-05 |
| 209887 | 0.378 | 5.19e-05 | ||
| 215969 | N-acetylglucosamine-1-phosphotransferase, gamma subunit (GNPTG) | NM_032520.3 | 0.362 | 5.50e-05 |
| 211014 | Elastin microfibril interfacer 2 (EMILIN2) | NM_032048.2 | 0.235 | 5.50e-05 |
| 211919 | 0.393 | 5.50e-05 | ||
| 210951 | Ferritin heavy-chain (FTH1) | NM_213975.1 | 0.401 | 6.77e-05 |
| 105008 | Cytochrome P450 19A2 (CYP19A2) | NM_214430.1 | 0.338 | 8.16e-05 |
| 210738 | Ferritin heavy-chain (FTH1) | NM_213975.1 | 0.424 | 8.16e-05 |
| 201823 | Cytochrome b-5 (CYB5) | NM_001001770.1 | 0.454 | 8.16e-05 |
| 100826 | Chromosome 15 open reading frame 24 (C15orf24) | NM_020154.2 | -0.230 | 8.39e-05 |
| 101872 | Anthrax toxin receptor 1 (ANTXR1), transcript variant 1 | NM_032208.1 | 0.339 | 8.39e-05 |
| 211040 | Cytochrome P450 11A1 (CYP11A1) | NM_214427.1 | 0.479 | 9.63e-05 |
| 103622 | Chaperonin containing TCP1, subunit 4 (delta) (CCT4) | NM_006430.2 | 0.222 | 0.00010 |
| 211683 | Ferritin heavy-chain (FTH1) | NM_213975.1 | 0.390 | 0.00010 |
| 209678 | Parvin, gamma (PARVG) | NM_022141.4 | 0.354 | 0.00012 |
| 211043 | Testis expressed sequence 261 (TEX261) | NM_144582.2 | 0.321 | 0.00014 |
| 100650 | Brain expressed, X-linked 1 (BEX1) | NM_018476.2 | 0.410 | 0.00017 |
| 102207 | Similar to RUN and FYVE domain-containing 2 (LOC441022) | XM_496700.1 | 0.322 | 0.00019 |
| 202502 | A disintegrin and metalloproteinase domain 5 (ADAM5) | NR_001448.1 | 0.265 | 0.00019 |
| 221253 | Adaptor-related protein complex 1, mu 2 subunit (AP1M2) | NM_005498.3 | 0.277 | 0.00019 |
| 210077 | Cytochrome P450 2C49 (CYP2C49) | NM_214420.1 | 0.211 | 0.00020 |
| 201085 | 0.288 | 0.00021 | ||
| 211785 | Zinc finger, DHHC domain containing 14 (ZDHHC14) | NM_153746.1 | 0.346 | 0.00023 |
| 104944 | GTP cyclohydrolase 1 (dopa-responsive dystonia) (GCH1) | NM_000161.1 | -0.593 | 0.00024 |
| 201672 | 0.293 | 0.00026 | ||
| 102125 | Hypothetical protein HSPC138 (HSPC138) | NM_016401.2 | 0.209 | 0.00026 |
| 211821 | Phosphatidylserine receptor (PTDSR) | NM_015167.1 | 0.726 | 0.00033 |
| 204992 | 0.415 | 0.00036 | ||
| 202380 | Protein phosphatase 1, regulatory subunit 2 pseudogene 3 (PPP1R2P3) | NR_002168.1 | 0.422 | 0.00037 |
| 213748 | Hypothetical protein LOC284106 (LOC284106) | XM_375449.1 | 0.221 | 0.00037 |
| 103177 | Cytochrome b-5 (CYB5) | NM_001001770.1 | 0.566 | 0.00037 |
| 103075 | Emopamil binding protein (sterol isomerase) (EBP) | NM_006579.1 | 0.227 | 0.00038 |
| 210827 | Membrane-associated protein 17 (MAP17) | NM_001001769.1 | 0.269 | 0.00039 |
| 213497 | NADH dehydrogenase (ubiquinone) 1, 1, 6kDa (NDUFC1) | NM_002494.2 | 0.271 | 0.00039 |
| 104615 | Superoxide dismutase 1, soluble (SOD1) | NM_000454.4 | 0.268 | 0.00040 |
| 103619 | Glucan (1,4-alpha-), branching enzyme 1 (GBE1) | NM_000158.1 | 0.291 | 0.00046 |
| 214976 | Cyclin M2 (CNNM2), transcript variant 1 | NM_017649.3 | 0.181 | 0.00049 |
| 216693 | Calcium/calmodulin-dependent protein kinase II beta (CAMK2B) | NM_172081.1 | -0.404 | 0.00052 |
| 101799 | Sarcolemma associated protein (SLMAP) | NM_007159.2 | 0.298 | 0.00052 |
| 100935 | ADP-ribosylation-like factor 6 interacting protein 6 (ARL6IP6) | NM_152522.2 | 0.246 | 0.00053 |
| 203697 | Hypothetical protein MGC40579 (MGC40579) | NM_152776.1 | 0.394 | 0.00055 |
| 101031 | RIKEN cDNA B230380D07 gene (B230380D07Rik) | NM_172772.1 | 0.354 | 0.00055 |
| 209872 | Aldo-keto reductase family 1, member C4 (AKR1C4) | NM_001818.2 | 0.634 | 0.00057 |
| 102689 | Sulfotransferase family, cytosolic, 2A (SULT2A1) | NM_003167.2 | 0.326 | 0.00060 |
| 214972 | Similar to Bax inhibitor-1 (BI-1) (LOC451883) | XM_509049.1 | 0.269 | 0.00060 |
| 209191 | Chromosome 20 open reading frame 50 (C20orf50) | XM_046437.7 | 0.342 | 0.00062 |
| 101010 | NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa (NDUFV1) | NM_007103.2 | 0.195 | 0.00069 |
| 217625 | Leucine rich repeat neuronal 1 (LRRN1) | NM_020873.3 | 0.235 | 0.00070 |
| 100267 | Transducer of ERBB2, 1 (TOB1) | NM_005749.2 | 0.252 | 0.00070 |
| 204605 | Maltase-glucoamylase (alpha-glucosidase) (MGAM) | NM_004668.1 | -0.273 | 0.00070 |
| 100575 | 17beta-estradiol dehydrogenase (HSD17B4) | NM_214306.1 | 0.262 | 0.00070 |
| 104294 | Sarcoglycan, epsilon (SGCE) | NM_003919.1 | 0.223 | 0.00075 |
| 214602 | Acetyl-Coenzyme A carboxylase alpha (ACACA), transcript variant 2 | NM_198839.1 | 0.294 | 0.00085 |
| 100781 | Protein kinase, AMP-activated, beta 2 non-catalytic subunit (PRKAB2) | NM_005399.3 | 0.267 | 0.00090 |
| 204606 | -0.229 | 0.00091 | ||
| 100545 | Isopentenyl-diphosphate delta isomerase (IDI1) | NM_004508.2 | 0.266 | 0.00111 |
| 210439 | FK506 binding protein 1A, 12kDa (FKBP1A), transcript variant 12B | NM_000801.2 | 0.233 | 0.00112 |
| 101524 | Alpha-1,3-galactosyltransferase (GGTA1) | NM_213810.1 | 0.274 | 0.00120 |
| 103263 | Retinol dehydrogenase 12 (all-trans and 9-cis) (RDH12) | NM_152443.1 | 0.297 | 0.00124 |
| 201437 | Hypothetical protein MGC40489 (MGC40489) | XM_373742.3 | -0.239 | 0.00124 |
| 219641 | Ras association (RalGDS/AF-6) domain family 4 (RASSF4) | NM_032023.3 | 0.294 | 0.00124 |
| 218092 | Procollagen C-endopeptidase enhancer (PCOLCE) | NM_002593.2 | 0.330 | 0.00124 |
| 214348 | Glycerol-3-phosphate dehydrogenase 1-like (GPD1L) | NM_015141.2 | 0.205 | 0.00133 |
| 210245 | Complement component 1, r subcomponent (C1R) | NM_001733.2 | 0.221 | 0.00136 |
| 209875 | Scavenger receptor class B member 1 (SCARB1) | NM_213967.1 | 0.253 | 0.00145 |
| 105364 | Tumor necrosis factor, alpha-induced protein 6 (TNFAIP6) | NM_007115.2 | 0.241 | 0.00147 |
| 212682 | Sulfotransferase family, cytosolic, 2B, member 1 (SULT2B1) | NM_177973.1 | 0.206 | 0.00149 |
| 102760 | 0.310 | 0.00152 | ||
| 101913 | Heat shock 60kDa protein 1 (chaperonin) (HSPD1) | NM_002156.4 | 0.265 | 0.00154 |
| 214601 | Serine/threonine kinase 19 (STK19), transcript variant 1 | NM_004197.1 | 0.298 | 0.00160 |
| 101632 | Nuclear receptor coactivator 2 (NCOA2) | NM_006540.1 | 0.287 | 0.00160 |
| 210848 | Annexin A7 (ANXA7), transcript variant 1 | NM_001156.2 | 0.182 | 0.00160 |
| 221285 | Serine (or cysteine) proteinase inhibitor, clade B member 3 (SERPINB3) | NM_006919.1 | 0.225 | 0.00160 |
| 219203 | Peroxiredoxin 2 (PRDX2), nuclear gene encoding mitochondrial protein | NM_005809.4 | 0.325 | 0.00170 |
| 216273 | 0.257 | 0.00185 | ||
| 217065 | Endonuclease G-like 1 (ENDOGL1) | NM_005107.1 | -0.364 | 0.00185 |
| 211482 | Ubiquitin-conjugating enzyme E2R 2 (UBE2R2) | NM_017811.3 | 0.229 | 0.00196 |
Gene profiling was done using 30 arrays and analysed using linear models. Fold change (M-values) and statistical significance (FDR-adjusted p-values) is shown. The clone names refer to hits to human, mouse or pig genes. Some genes are represented by several different clones on the array and may therefore show up more than once in the table, while some have no hits to the abovementioned species.