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. 2008 Jan;178(1):339–350. doi: 10.1534/genetics.107.081810

TABLE 5.

Minimum and average interspecific sequence differences

Locus Length (bp) Min (kij) d12 d12 (per site)
CT066 1346 5 17.895 0.01330
CT093 1389 3 8.658 0.00623
CT166 1236 7 19.668 0.01591
CT179 892 1 17.906 0.02007
CT198 693 4 15.537 0.02242
CT251 1656 17 33.663 0.02033
CT268 1881 14 29.333 0.01559
Total 9093 51 142.66 0.01569

Min (kij) refers to the minimum number of interspecific pairwise nucleotide differences per locus (an estimator of τ), while d12 is the average number of pairwise (interspecific) differences. The final column presents d12 estimates on a per-site basis, with the weighted average value given in the “Total” row. These analyses were based on the total data set comprising all four populations per species. From these data, we calculated the ancestral population size as θA = d12 − min (kij).