TABLE 2.
Number of haplotypes per locus for model HAP_IBD, and average total number of haplotypes for all four models, averaged across the 20 combined replicates of the low- and high-heritability trait
| No. of markers | Total no. of haplotypes
|
Average no. of haplotypes per locus
|
||||||
|---|---|---|---|---|---|---|---|---|
| SNP1 | SNP2 | HAP_IBD2 | HAP_IBD10 | SNP1 | SNP2 | HAP_IBD2 | HAP_IBD10 | |
| 2,343.0 | 4,685 | 8,022 | 620,316 | 192,926 | 2.0 | 3.4 | 264.8 | 77.0 |
| 1,166.4 | 2,313 | 4,031 | 365,231 | 154,675 | 2.0 | 3.5 | 313.1 | 123.9 |
| 463.9 | 935 | 1,652 | 229,324 | 128,171 | 2.0 | 3.5 | 494.4 | 258.8 |
| 232.1 | 474 | 841 | 156,443 | 124,348 | 2.0 | 3.6 | 674.1 | 491.3 |
| 119.0 | 249 | 443 | 129,035 | 110,574 | 2.0 | 3.6 | 1,085.6 | 918.7 |