Table 1. MeSH Term Analysis for Gene and Diseases Association in Publications; Examples.
Disease MeSH Term | Genome | MGC | HFLEX7000 | MGC/Genome | HFLEX7000/Genome | HFLEX7000/MGC | |||
# | (%) | # | (%) | # | (%) | ||||
Neoplasms | 7614 | 23.0 | 3904 | 40.0 | 1884 | 56.4 | 1.74 | 2.45 | 1.41 |
Pathological Conditions, Signs and Symptoms | 7464 | 22.5 | 3631 | 37.2 | 1775 | 53.2 | 1.65 | 2.36 | 1.43 |
Nervous System Diseases | 5600 | 16.9 | 2753 | 28.2 | 1366 | 40.9 | 1.67 | 2.42 | 1.45 |
Congenital, Hereditary, and Neonatal Diseases and Abnormalities | 5269 | 15.9 | 2599 | 26.6 | 1287 | 38.5 | 1.67 | 2.42 | 1.4 |
Digestive System Diseases | 4710 | 14.2 | 2465 | 25.2 | 1253 | 37.5 | 1.77 | 2.64 | 1.49 |
Immune System Diseases | 4583 | 13.8 | 2302 | 23.6 | 1170 | 35.0 | 1.70 | 2.53 | 1.49 |
Skin and Connective Tissue Diseases | 4386 | 13.2 | 2256 | 23.1 | 1192 | 35.7 | 1.74 | 2.70 | 1.55 |
Urologic and Male Genital Diseases | 4025 | 12.2 | 2103 | 21.5 | 1087 | 32.6 | 1.77 | 2.68 | 1.51 |
Endocrine System Diseases | 4016 | 12.1 | 2060 | 21.1 | 1047 | 31.4 | 1.74 | 2.59 | 1.49 |
Cardiovascular Diseases | 3969 | 12.0 | 2034 | 20.8 | 1031 | 30.9 | 1.74 | 2.58 | 1.48 |
Hemic and Lymphatic Diseases | 3956 | 11.9 | 2049 | 21.0 | 1026 | 30.7 | 1.76 | 2.57 | 1.47 |
Female Genital Diseases and Pregnancy Complications | 3826 | 11.6 | 2011 | 20.6 | 1028 | 30.8 | 1.78 | 2.66 | 1.50 |
Nutritional and Metabolic Diseases | 3670 | 11.1 | 1897 | 19.4 | 955 | 28.6 | 1.75 | 2.58 | 1.47 |
Respiratory Tract Diseases | 3524 | 10.6 | 1808 | 18.5 | 944 | 28.3 | 1.74 | 2.66 | 1.53 |
Musculoskeletal Diseases | 3518 | 10.6 | 1751 | 17.9 | 913 | 27.3 | 1.69 | 2.57 | 1.53 |
Disorders of Environmental Origin | 3466 | 10.5 | 1809 | 18.5 | 935 | 28.0 | 1.77 | 2.68 | 1.51 |
Virus Diseases | 2963 | 8.9 | 1527 | 15.6 | 804 | 24.1 | 1.75 | 2.69 | 1.54 |
Mental Disorders | 2903 | 8.8 | 1451 | 14.8 | 785 | 23.5 | 1.69 | 2.68 | 1.58 |
Bacterial Infections and Mycoses | 2817 | 8.5 | 1441 | 14.7 | 754 | 22.6 | 1.73 | 2.65 | 1.53 |
Eye Diseases | 2700 | 8.2 | 1318 | 13.5 | 709 | 21.2 | 1.65 | 2.60 | 1.57 |
Stomatognathic Diseases | 2101 | 6.3 | 1069 | 10.9 | 583 | 17.5 | 1.72 | 2.75 | 1.60 |
Otorhinolaryngologic Diseases | 1882 | 5.7 | 941 | 9.6 | 503 | 15.1 | 1.69 | 2.65 | 1.56 |
Parasitic Diseases | 1739 | 5.3 | 918 | 9.4 | 493 | 14.8 | 1.79 | 2.81 | 1.57 |
Examples of MedGene analysis of disease term association with genes in PubMed, using either all human genes (2004), unique genes in MGC (2004), or HFLEX7000 (targets). Numerical values and percentiles of each class associated with genes are shown. Relative MeSH term associations in either MGC or HFLEX7000 to the genome, and in HFLEX7000 to MGC examine a potential bias in MGC or HFLEX7000 towards specific MeSH terms.