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. 2007 Nov 22;6:154. doi: 10.1186/1475-2875-6-154

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Copyright © 2007 Garg et al; licensee BioMed Central Ltd.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

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A neighbor-joining (NJ) tree depicting the relationships between different AMA1 haplotypes observed among Indian P. falciparum populations. The distance matrix was prepared using Kimura 2-parameter evolutionary model. Alignment substitutions were considered for analysis while gaps were ignored. Numbers below the line indicate percentage bootstrap values for 1000 replications. The scale bar represents a genetic distance. The partial AMA1 sequence of P. reichenowi [AJ252087], the closet species to P. falciparum was taken as an out group [35].