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. Author manuscript; available in PMC: 2008 Jan 28.
Published in final edited form as: Clin Exp Metastasis. 2007 Sep 25;24(7):551–565. doi: 10.1007/s10585-007-9092-8

Genes involved in protein localization/secretion altered in 435/BRMS cells relative to 435 cells.

Accession no.a Symbol Signal Log
Ratiob
FDR adj
P-Valuec
Induced
NM_004355 CD74 3.033860 0.002536
NM_000014 A2M 2.081898 0.004244
NM_003469 SCG2 1.564269 0.002536
NM_005387, 016320, 139131-32 NUP98 1.463201 0.045012
NM_001465, 199335 FYB 1.235783 0.023193
NM_012219 MRAS 1.165204 0.012502
NM_032379, 032943, 206927-30 SYTL2 1.057945 0.005790
NM_016429 COPZ2 1.041162 0.027706
NM_003916 AP1S2 0.997023 0.022876
NM_018261, 178237 SEC3L1 0.924925 0.040666
NM_006946 SPTBN2 0.805178 0.031828
NM_018714 COG1 0.774169 0.041457
NM_007190 SEC23IP 0.662779 0.041697
Repressed
NM_003917, 080545 AP1G2 −0.593089 0.044733
NM_031231, 031232 APBA2BP −0.624727 0.032046
NM_013337 TIMM22 −0.680658 0.033443
NM_012290 TLK1 −0.697219 0.029565
NM_006912 RIT1 −0.776814 0.029936
NM_004587 RRBP1 −0.819226 0.036365
NM_002618 PEX13 −0.847441 0.016837
NM_004161 RAB1A −0.869007 0.041363
NM_003099, 148955, 152826 SNX1 −0.897803 0.024230
NM_014426, 152227 SNX5 −1.002329 0.007902
NM_016530 RAB8B −1.003628 0.021477
NM_007107 SSR3 −1.230001 0.022588
NM_022365 DNAJC1 −1.634016 0.000907
a

GenBank accession number

b

Signal Log ratio: power value is 2, for example 3.033860 is equal to 23.033860.

c

For explanation of processing used to obtain FDR-adjusted P-value see materials and methods.