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. 2007 Nov 27;8:463. doi: 10.1186/1471-2105-8-463

Table 1.

The performance of SVM models developed using different types of compositions. These models were trained and tested on DNAset, a dataset of DNA-binding and non-binding protein domains/chains.

Composition Type Threshold Sensitivity Specificity Accuracy MCC
Amino Acids 0.3 78.11 80.80 79.80 0.58
Dipeptides 0.0 73.35 77.60 76.01 0.50
4-parts amino acids 0.0 77.45 77.60 77.53 0.54
PSSM 0.1 86.32 86.80 86.62 0.72