Table 5.
Gene number | Gene product | Functional category | TM helices | Non-syntenic hits |
SAR11_0524 | unknown | unknown | 0 | |
SAR11_0525 | nucleotide sugar epimerase | CHO metabolism | 1 | |
SAR11_0526 | nucleotide sugar epimerase | CHO metabolism | 3 | |
SAR11_0527 | acetolactate synthase | aa metabolism | 5 | |
SAR11_0528 | methyl transferase | aa metabolism | 22 | |
SAR11_0529 | alcohol dehydrogenase | cho metabolism | 11 | |
SAR11_0530 | phospholipid synthase | om | 6 | |
SAR11_0531 | short-chain dehyrogenase | CHO metabolism | 4 | |
SAR11_0532 | oxidoreductase | unknown specificity | 1 | 0 |
SAR11_0533 | methyltransferase | unknown specificity | 2 | |
SAR11_0534 | aminotransferase | unknown | 2 | 3 |
SAR11_0535 | unknown | unknown | 1 | 0 |
SAR11_0536 | tktc | pentose-phosphate | 5 | |
SAR11_0537 | tktn | pentose-phosphate | 11 | |
SAR11_0538 | nucleotide sugar epimerase | CHO metabolism | 34 | |
SAR11_0539 | carbohydrate kinase | CHO metabolism | 47 | |
SAR11_0540 | glycosyl transferase | CHO metabolism | 2 | 2 |
SAR11_0541 | nucleotide sugar dehydratasez | nt-CHO metabolism | 11 | |
SAR11_0542 | unknown | unknown | 9 | 0 |
SAR11_0543 | unknown | unknown | 3 | 0 |
SAR11_0544 | unknown | unknown | 4 | 0 |
SAR11_0545 | phosphoheptose isomerase | CHO metabolism | 10 | |
SAR11_0546 | sugar phoshatase | om | 4 | |
SAR11_0547 | amino-acid oxidase | aa metabolism | 15 | |
SAR11_0548 | unknown | unknown | 10 | 0 |
SAR11_0549 | unknown | unknown | 10 | 0 |
SAR11_0550 | glycosyl transferase | om | 9 | |
SAR11_0551 | probable phage integrase | unknown | 3 | |
SAR11_0552 | glycosyl tranferase | om | 2 | |
SAR11_0553 | amino transferase | om | 5 | |
SAR11_0554 | carbamoyl transferase | antibiotic synthesis | 57 | |
SAR11_0555 | phospholipid synthase | om | 0 | |
SAR11_0556 | glycosyl tranferase | om | 2 | |
SAR11_0557 | glycosyl tranferase | om | 3 | 2 |
SAR11_0558 | phospholipid synthase | om | 0 | |
SAR11_0559 | trehalose phosphate synthase | om | 0 | |
SAR11_0560 | methyl transferase | unknown | 0 | |
SAR11_0561 | oxidoreductase | phytobilin synthesis | 1 | |
SAR11_0563 | glycosyl transferase | cho metabolism | 4 | |
SAR11_0564 | unknown | unknown | 1 | |
SAR11_0565 | unknown | unknown | 13 | |
SAR11_0566 | o-antigen polymerase | om | 10 | 40 |
SAR11_0567 | unknown | unknown | 11 | 55 |
SAR11_0568 | oxidoreductase | aa metabolism | 1 |
Bold font indicates genes involved in inner and outer core lipopolysaccharide (LPS) biosynthesis. Genes involved in the biosynthesis of the unexposed (lipid-A portion) of LPS are not present in HVR2. (om) outer membrane; (CHO) carbohydrate; (aa) amino acid