Table 1. Differentially expressed proteins.
| Protein name | F-test p-value | Fold change UPvC | p-value | Fold change APvUP | p-value | Fold change APvC | p-value |
| 14-3-3 protein epsilon | 0.0001 | 0.2700 | 0.0540 | −0.3760 | 0.0110 | −0.1060 | 0.4400 |
| 60 kDa heat shock protein | 0.0008 | −0.0860 | 0.4101 | −0.3260 | 0.0042 | −0.4120 | 0.0003 |
| 60 kDa heat shock protein | 0.0001 | 0.0030 | 0.9717 | −0.3970 | 0.0001 | −0.3940 | 0.0001 |
| Actin. aortic smooth muscle | 0.0004 | −0.4010 | 0.0001 | 0.0630 | 0.5198 | −0.3380 | 0.0009 |
| Actin. cytoplasmic 1 | 0.0030 | 0.1100 | 0.2746 | −0.3390 | 0.0021 | −0.2290 | 0.0250 |
| Actin. cytoplasmic 1 | 0.0003 | −0.0150 | 0.9135 | 0.2140 | 0.1390 | 0.1990 | 0.1447 |
| Actin. cytoplasmic 1 | 0.0002 | −0.0480 | 0.7852 | 0.6580 | 0.0008 | 0.6100 | 0.0011 |
| Aldehyde dehydrogenase | 0.0022 | −0.0930 | 0.3590 | 0.2230 | 0.0374 | 0.1300 | 0.1996 |
| Alpha-centractin | 0.0047 | −0.2600 | 0.0296 | −0.1810 | 0.1394 | −0.4410 | 0.0004 |
| Alpha-enolase | 0.0033 | 0.1910 | 0.0742 | −0.3340 | 0.0035 | −0.1430 | 0.1764 |
| Dynamin-1 | 0.0033 | 0.2050 | 0.2013 | 0.1010 | 0.5421 | 0.3060 | 0.0619 |
| Dynamin-1 | 0.0028 | −0.0280 | 0.8353 | −0.1730 | 0.2164 | −0.2010 | 0.1380 |
| Electron transfer flavoprotein beta-subunit | 0.0000 | 0.5240 | 0.0014 | 0.5700 | 0.0008 | 1.0940 | 0.0000 |
| Elongation factor 1-delta | 0.0003 | −0.0590 | 0.5557 | −0.3860 | 0.0006 | −0.4440 | 0.0001 |
| Enoyl-CoA hydratase. mitochondrial precursor | 0.0005 | −2.4360 | 0.0001 | 0.6850 | 0.2429 | −1.7510 | 0.0031 |
| Fructose-bisphosphate aldolase C | 0.0004 | −0.1910 | 0.1167 | −0.3450 | 0.0078 | −0.5350 | 0.0001 |
| Glutamate dehydrogenase 1 | 0.0000 | −1.6530 | 0.0000 | 0.5070 | 0.0100 | −1.1460 | 0.0000 |
| Glutamate dehydrogenase 1 | 0.0017 | 0.2050 | 0.0095 | 0.0940 | 0.2357 | 0.2990 | 0.0003 |
| Glutamate dehydrogenase 1 | 0.0019 | 0.1730 | 0.0892 | 0.2230 | 0.0359 | 0.3960 | 0.0003 |
| Hemoglobin subunit beta | 0.0002 | 0.1270 | 0.1216 | −0.3220 | 0.0004 | −0.1950 | 0.0201 |
| Malate dehydrogenase. mitochondrial precursor | 0.0022 | 0.0290 | 0.7069 | −0.2830 | 0.0009 | −0.2540 | 0.0017 |
| NADH-ubiquinone oxidoreductase 23 kDa subunit | 0.0008 | 0.0450 | 0.5426 | −0.2860 | 0.0004 | −0.2410 | 0.0021 |
| Neurofilament triplet M protein | 0.0001 | −0.1580 | 0.1269 | −0.1160 | 0.2655 | −0.2740 | 0.0105 |
| PAF acetylhydrolase 30 kDa subunit | 0.0000 | −0.3930 | 0.0105 | 0.0500 | 0.7448 | −0.3430 | 0.0252 |
| Phosphoglycerate kinase 1 | 0.0013 | 0.2350 | 0.0191 | −0.1800 | 0.0793 | 0.0550 | 0.5694 |
| Sorcin | 0.0000 | −0.9910 | 0.0000 | 0.3230 | 0.0138 | −0.6680 | 0.0000 |
| Tubulin alpha-1 chain | 0.0004 | −0.0680 | 0.6494 | 0.6320 | 0.0002 | 0.5640 | 0.0007 |
| Tubulin alpha-ubiquitous chain | 0.0045 | −0.3750 | 0.0238 | 0.6400 | 0.0004 | 0.2650 | 0.1029 |
| Tubulin alpha-ubiquitous chain | 0.0011 | 0.1280 | 0.2623 | 0.0790 | 0.5054 | 0.2070 | 0.0763 |
| Tubulin beta-4 chain | 0.0000 | −0.2030 | 0.1518 | 0.8450 | 0.0000 | 0.6420 | 0.0001 |
| Ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.0001 | 0.1210 | 0.1424 | −0.3930 | 0.0000 | −0.2720 | 0.0017 |
| Ubiquitin carboxyl-terminal hydrolase isozyme L1 | 0.0003 | −0.0790 | 0.4607 | 0.1030 | 0.3563 | 0.0250 | 0.8171 |
| Ubiquitin carboxyl-terminal hydrolase isozyme L1 | 0.0002 | −0.0580 | 0.5292 | −0.3090 | 0.0020 | −0.3670 | 0.0002 |
| Protein name | F-test p-value | Fold change CPvAP | p-value | Fold change CPvC | p-value | Fold change CPvUP | p-value |
| 14-3-3 protein epsilon | 0.0001 | 0.6220 | 0.0000 | 0.5160 | 0.0006 | 0.2460 | 0.0795 |
| 60 kDa heat shock protein | 0.0008 | 0.0530 | 0.5794 | −0.3590 | 0.0014 | −0.2730 | 0.0119 |
| 60 kDa heat shock protein | 0.0001 | 0.1590 | 0.0547 | −0.2340 | 0.0118 | −0.2380 | 0.0102 |
| Actin. aortic smooth muscle | 0.0004 | 0.1310 | 0.1349 | −0.2070 | 0.0341 | 0.1940 | 0.0449 |
| Actin. cytoplasmic 1 | 0.0030 | −0.0160 | 0.8582 | −0.2450 | 0.0182 | −0.3550 | 0.0010 |
| Actin. cytoplasmic 1 | 0.0003 | −0.6020 | 0.0000 | −0.4030 | 0.0054 | −0.3880 | 0.0079 |
| Actin. cytoplasmic 1 | 0.0002 | −0.7510 | 0.0000 | −0.1410 | 0.4263 | −0.0930 | 0.5991 |
| Aldehyde dehydrogenase | 0.0022 | 0.1760 | 0.0600 | 0.3070 | 0.0041 | 0.3990 | 0.0003 |
| Alpha-centractin | 0.0047 | 0.1320 | 0.2165 | −0.3090 | 0.0115 | −0.0480 | 0.6797 |
| Alpha-enolase | 0.0033 | −0.0700 | 0.4669 | −0.2130 | 0.0494 | −0.4030 | 0.0004 |
| Dynamin-1 | 0.0033 | −0.5400 | 0.0007 | −0.2340 | 0.1497 | −0.4390 | 0.0086 |
| Dynamin-1 | 0.0028 | 0.4860 | 0.0003 | 0.2840 | 0.0406 | 0.3120 | 0.0242 |
| Electron transfer flavoprotein beta-subunit | 0.0000 | −0.1240 | 0.3782 | 0.9690 | 0.0000 | 0.4460 | 0.0057 |
| Elongation factor 1-delta | 0.0003 | 0.1650 | 0.0752 | −0.2790 | 0.0081 | −0.2200 | 0.0321 |
| Enoyl-CoA hydratase. mitochondrial precursor | 0.0005 | 0.7240 | 0.1628 | −1.0270 | 0.0754 | 1.4090 | 0.0157 |
| Fructose-bisphosphate aldolase C | 0.0004 | 0.3580 | 0.0020 | −0.1780 | 0.1465 | 0.0130 | 0.9147 |
| Glutamate dehydrogenase 1 | 0.0000 | −0.0050 | 0.9742 | −1.1520 | 0.0000 | 0.5020 | 0.0085 |
| Glutamate dehydrogenase 1 | 0.0017 | −0.0350 | 0.6189 | 0.2650 | 0.0012 | 0.0600 | 0.4350 |
| Glutamate dehydrogenase 1 | 0.0019 | −0.0620 | 0.4967 | 0.3340 | 0.0018 | 0.1610 | 0.1131 |
| Hemoglobin subunit beta | 0.0002 | −0.0430 | 0.5587 | −0.2380 | 0.0056 | −0.3660 | 0.0001 |
| Malate dehydrogenase. mitochondrial precursor | 0.0022 | 0.0770 | 0.2700 | −0.1770 | 0.0263 | −0.2060 | 0.0100 |
| NADH-ubiquinone oxidoreductase 23 kDa subunit | 0.0008 | 0.0380 | 0.5666 | −0.2030 | 0.0098 | −0.2480 | 0.0015 |
| Neurofilament triplet M protein | 0.0001 | −0.2750 | 0.0050 | −0.5490 | 0.0000 | −0.3910 | 0.0004 |
| PAF acetylhydrolase 30 kDa subunit | 0.0000 | 0.7700 | 0.0000 | 0.4280 | 0.0063 | 0.8200 | 0.0000 |
| Phosphoglycerate kinase 1 | 0.0013 | −0.2240 | 0.0150 | −0.1680 | 0.0918 | −0.4040 | 0.0002 |
| Sorcin | 0.0000 | 0.5320 | 0.0000 | −0.1360 | 0.2738 | 0.8550 | 0.0000 |
| Tubulin alpha-1 chain | 0.0004 | −0.1170 | 0.3784 | 0.4470 | 0.0068 | 0.5140 | 0.0014 |
| Tubulin alpha-ubiquitous chain | 0.0045 | −0.1820 | 0.2166 | 0.0820 | 0.6092 | 0.4580 | 0.0069 |
| Tubulin alpha-ubiquitous chain | 0.0011 | −0.4320 | 0.0002 | −0.2250 | 0.0557 | −0.3530 | 0.0035 |
| Tubulin beta-4 chain | 0.0000 | −0.3370 | 0.0120 | 0.3050 | 0.0365 | 0.5080 | 0.0008 |
| Ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.0001 | 0.0710 | 0.3398 | −0.2000 | 0.0187 | −0.3210 | 0.0003 |
| Ubiquitin carboxyl-terminal hydrolase isozyme L1 | 0.0003 | −0.4440 | 0.0001 | −0.4200 | 0.0004 | −0.3410 | 0.0029 |
| Ubiquitin carboxyl-terminal hydrolase isozyme L1 | 0.0002 | −0.0070 | 0.9334 | −0.3740 | 0.0002 | −0.3160 | 0.0012 |
Proteins that are differentially expressed between groups. Significance defined by moderated nested F-test statistics (F-test p-value<0.005. moderated t-test p<0.001 are written with bold text). Fold change is in log2.