Skip to main content
. 2007 Nov 22;8:429. doi: 10.1186/1471-2164-8-429

Table 1.

Transcripts (TFR pool) related cell wall metabolism categorized by the first hit in the MIPS2 catalog

Probeset ID GenBank Annotation VvGI5 UniProt ID Gene Name Description Function Profile Fold Change
1622791_at CB973455 TC56114 Q6J8X2 Cellulose synthase Cell Wall Biosynthesis 2 112.68
1619280_at CF211860 TC59569 Q6J8W9 Cellulose synthase Cell Wall Biosynthesis 2 87.25
1613018_at CB971117 TC61561 Q851L8 Cellulose synthase Cell Wall Biosynthesis 2 6.92
1606646_at CA812296 TC56773 Q6XZC2 Cellulose synthase Cell Wall Biosynthesis 2 4.34
1615577_at CB340193 TC52068 Q6XP46 Cellulose synthase Cell Wall Biosynthesis 3 3.5
1607069_at CB982496 TC53451 Q45KQ0 Cellulose synthase Cell Wall Biosynthesis 10 3.18
1611149_at BM437543 TC56091 Q3Y6V1 Cellulose synthase Cell Wall Biosynthesis 21 2.85
1612999_at CF513786 - O80890 Cellulose synthase Cell Wall Biosynthesis 7 2.76
1620206_at CF515519 TC66132 Q6FD0 β 1,4-Mannan synthase Cell Wall Biosynthesis 15 2.69
1616808_at CF207742 TC57597 Q45KQ0 Cellulose synthase Cell Wall Biosynthesis 21 2.21
1619938_at CF514664 TC63356 Q6YBV2 Cellulose synthase Cell Wall Biosynthesis 3 2.19
1620840_at CB968965 TC53122 Q4F8K2 α-expansin Cell Wall Expansion 2 20.26
1619010_s_at BQ794765 TC54832 Q84US9 Expansin Cell Wall Expansion 10 18.54
1608191_at CD798831 TC64448 Q49QW6 Expansin Cell Wall Expansion 21 13.18
1612253_at CB970527 TC62108 Q6RX68 Expansin Cell Wall Expansion 3 9.23
1608074_s_at CF215793 TC62965 Q84UT0 Expansin Cell Wall Expansion 21 6.28
1610418_at BQ798078 TC67284 Q8GZD3 Expansin Cell Wall Expansion 10 4.9
1613527_at CB978490 TC53065 Q6T5H5 Expansin Cell Wall Expansion 15 4.6
1618121_at CF213691 - Q9LUI1 Extensin Cell Wall Expansion 2 4.1
1608504_at BQ797231 TC52168 Q6K4C6 Expansin Cell Wall Expansion 4 2.56
1612154_at CB970048 TC61667 O50044 KDO 8-P synthase Cell Wall Expansion 3 2.31
1609651_at CF404678 TC55463 Q9LJX2 Pectinesterase inhibitor Cell Wall Modification 2 690.87
1618848_at CB977336 TC52577 Q9ZRV1 Xyloglucan endotransglycosylase 1 Cell Wall Modification 13 184.42
1622288_at CB974798 TC59058 Q9M660 Cell-Wall P4 Cell Wall Modification 2 124.19
1617556_s_at BQ797260 TC67257 Q9M4I1 Proline-rich cell wall protein Cell Wall Modification 10 105.38
1619762_at CF214586 TC67718 Q7Y250 Arabinogalactan protein Cell Wall Modification 2 61.79
1620201_at CB972625 TC70982 Q53WM8 Pectinesterase Cell Wall Modification 2 42.57
1619519_at CB971445 TC65487 Q7Y250 Arabinogalactan protein Cell Wall Modification 2 39.53
1616045_a_at AJ237983 - Q9M4I0 Proline-rich cell wall protein Cell Wall Modification 11 38.03
1617023_at CF210510 TC53552 FLA1 Arabinogalactan protein Cell Wall Modification 3 37.53
1611601_at CB977009 TC57247 Q6ZDX2 Pectinesterase Cell Wall Modification 2 34.83
1619613_at CD801720 TC68597 Q9SAP3 Proline-rich protein Cell Wall Modification 2 34.56
1616528_s_at CD801342 TC55188 Q1SAY6 Proline-rich protein Cell Wall Modification 2 33.73
1621880_s_at CK138206 TC66098 Q8VZG5 β-xylosidase Cell Wall Modification 3 31.38
1608727_at CB973483 TC56396 Q9LZX4 Fasciclin arabinogalactan protein 10 Cell Wall Modification 3 30.04
1615533_s_at CF415374 TC51824 Q7Y252 Endo-xyloglucan transferase Cell Wall Modification 3 27.95
1622481_x_at CF568921 TC67150 Q39763 Proline-rich protein Cell Wall Modification 1 27.63
1614426_at CD801116 TC64184 Q4F8J3 Xyloglucan endotransglycosylase Cell Wall Modification 3 25.94
1619522_at AY043231 TC56838 Q94B17 β-galactosidase Cell Wall Modification 3 24.53
1622292_at CF403386 TC69174 Q949Z1 polygalacturonase Cell Wall Modification 2 24.24
1622295_at CF215662 TC68541 Q5CCP8 β-galactosidase Cell Wall Modification 3 24.1
1621477_s_at CF215974 TC67884 Q9LYT5 Pectinesterase Cell Wall Modification 1 23.62
1622121_at BQ799039 TC58094 Q4F8J0 Cellulase Cell Wall Modification 3 22.85
1615201_at CF512517 TC63907 Q96232 Proline-rich-like protein Cell Wall Modification 3 22.42
1618657_at CF211626 TC56055 Q84LI7 Exopolygalacturonase Cell Wall Modification 2 20.99
1616158_at CD801717 TC53176 Q4JLV6 Pectate lyase Cell Wall Modification 21 20.15
1612239_at CF610039 TC55421 Q8VZG5 β-xylosidase Cell Wall Modification 2 19.96
1620140_at CF208989 TC53499 Q40161 Polygalacturonase Cell Wall Modification 2 19.6
1611747_at CF608890 TC65113 Q7XAS3 β-D-glucosidase Cell Wall Modification 3 17.94
1609909_s_at CF206328 TC64184 Q4F8J3 Xyloglucan Endotransglycosylase Cell Wall Modification 3 15.14
1608313_at CF209144 TC52275 Q76MS4 β-xylosidase Cell Wall Modification 2 14.41
1615574_at CB977067 TC56317 Q9M5J0 Pectinesterase Cell Wall Modification 1 14.03
1619612_at CF211611 TC67414 Q94KD8 β-xylosidase Cell Wall Modification 2 13.83
1610073_at CF206157 TC51796 Q8S902 Xyloglucan Endotransglycosylase Cell Wall Modification 3 13.77
1621251_s_at BQ795002 TC69305 Q8W3L8 Xyloglucan Endotransglycosylase 2 Cell Wall Modification 10 13.64
1622735_s_at CB340122 TC51796 Q84JX3 Xyloglucan Endotransglycosylase Cell Wall Modification 3 13.47
1613844_at CF404099 TC54968 Q9LUG8 Endo-1,3-1,4-β-D-glucanase Cell Wall Modification 3 13.27
1617755_at CF213513 TC52924 Q8GSQ4 Pectin-glucuronyltransferase Cell Wall Modification 2 12.86
1615746_at CB970034 TC53433 Q9FXI9 Endo-1,4-β-glucanase Cell Wall Modification 3 11.99
1617785_at CD800122 TC54681 Q9LW90 Pectinesterase Cell Wall Modification 3 11.97
1607374_at CF404162 TC69448 Q7XAS3 β-D-glucosidase Cell Wall Modification 3 11.77
1610311_at CF373485 TC52429 Q41725 Arabinogalactan protein Cell Wall Modification 3 10.99
1620096_at CF372841 TC57673 Q4F986 Xyloglucan endotransglycosylase Cell Wall Modification 2 10.81
1616093_at CF404665 TC69415 Q7XA92 Pectinesterase Cell Wall Modification 3 10.36
1613467_at CF212805 TC54247 Q9FSW6 Arabinogalactan protein Cell Wall Modification 15 10.08
1617875_at CB971740 TC61493 O04477 β-N-acetylhexosaminidase Cell Wall Modification 3 9.73
1614803_at AY046416 TC70108 Q8LGR6 Proline-rich protein Cell Wall Modification 3 9.22
1616822_at AF220196 TC70108 Q8LGR6 Proline rich protein Cell Wall Modification 3 9.04
1610756_at CF604824 TC55088 Q9LT39 Polygalacturonase inhibitor Cell Wall Modification 1 8.2
1622591_at CB981129 TC70200 Q9FHN6 Pectinesterase Cell Wall Modification 2 8.06
1612672_at CF215975 TC62593 Q9SEE7 Pectinesterase Cell Wall Modification 2 7.61
1616522_at CF403905 TC55346 Q9LEB0 Pectinesterase Cell Wall Modification 2 7.51
1615198_at CF209943 TC65883 Q9LEC9 β-xylosidase Cell Wall Modification 3 7.48
1608756_at BQ798436 TC59719 Q84LI7 Polygalacturonase Cell Wall Modification 2 7.15
1609790_at CF207994 TC55069 Q4F8J3 Xyloglucan endotransglycosylase Cell Wall Modification 2 6.87
1614877_at CB002982 TC66230 Q9C8T5 Proline-rich protein Cell Wall Modification 2 6.78
1613330_at CF404655 - Q93Z77 Pectate lyase Cell Wall Modification 3 6.64
1608120_at CF603941 TC70545 Q6U6I9 Pectate lyase Cell Wall Modification 2 6.6
1613677_at CB969707 TC51953 Q6J192 Arabinogalactan protein Cell Wall Modification 2 6.16
1619383_s_at BQ794831 TC66587 Q5CCQ0 β-galactosidase Cell Wall Modification 3 6.14
1615603_at CB346190 TC64570 Q8VY93 Proline-rich protein Cell Wall Modification 3 5.75
1608180_at CF201469 TC68224 O23950 Endo-xyloglucan transferase Cell Wall Modification 2 5.51
1609593_at CB981468 TC68226 Q9LZV3 (1-4)-β-mannan endohydrolase Cell Wall Modification 15 5.49
1621225_at CB974537 TC52140 Q9SUP5 Polygalacturonase Cell Wall Modification 21 5.12
1613415_at AB074999 TC45132 Q8W3L8 Xyloglucan endotransglycosylase 1 Cell Wall Modification 10 5.1
1615995_at CF212592 - P24806 Xyloglucan Endotransglucosylase 24 Cell Wall Modification 21 5.02
1615809_at CB980277 TC69342 Q38908 Xyloglucan endotransglucosylase 30 Cell Wall Modification 11 4.87
1613719_at CF214562 TC69710 Q7Y250 Arabinogalactan protein Cell Wall Modification 2 4.8
1613528_at CF513262 TC66769 Q8LPS9 Pectinesterase Cell Wall Modification 2 4.56
1612668_at CF519076 TC61610 Q5CHL3 Hydroxyproline-rich glycoprotein Cell Wall Modification 21 4.32
1620063_at CB921343 TC61082 Q9M3U4 β-1-3 glucanase Cell Wall Modification 11 4.3
1611233_at CF605724 TC66632 Q4W7I3 β-xylosidase Cell Wall Modification 3 4.18
1622770_at CF209970 TC66250 O65186 Cellulase Cell Wall Modification 13 4.15
1609653_at BQ797078 TC70494 Q9SBM1 Hydroxyproline-rich glycoprotein Cell Wall Modification 10 4.15
1620618_at BQ794587 TC55377 Q8LAB2 Proline-rich protein Cell Wall Modification 2 3.59
1608799_at BQ800204 TC58800 Q4ABV3 Pectinesterase Cell Wall Modification 3 3.55
1616523_s_at CF512513 TC63963 Q8L9T8 Arabinogalactan protein Cell Wall Modification 1 3.53
1606652_at CB969544 TC52628 Q8H1N7 Polygalacturonase Cell Wall Modification 2 3.52
1622353_at BQ800489 TC51768 Q5TIN5 β-6-xylosyltransferase Cell Wall Modification 3 3.41
1619659_s_at CF405842 TC68391 A1IIA8 Pectate lyase Cell Wall Modification 14 3.37
1617920_at CF609275 TC52380 Q6QLN2 Endo-1,4-β-glucanase Cell Wall Modification 2 3.31
1608896_at BQ796455 TC59657 Q5BM98 Secondary cell wall-related glycosyltransferase Cell Wall Modification 4 3.24
1618849_at BQ799201 TC63732 Q9SUP5 Polygalacturonase Cell Wall Modification 21 3.16
1610996_at BQ794786 TC63941 Q43111 Pectinesterase 3 Cell Wall Modification 14 3.15
1615125_at CF372050 TC67073 Q5BM97 Secondary cell wall-related glycosyltransferase family 14 Cell Wall Modification 2 3.09
1608945_at BQ793580 TC54729 P35694 Xyloglucan endotransglycosylase Cell Wall Modification 15 3.09
1607567_at BQ795116 TC54314 Q564G6 Galactomannan galactosyltransferase Cell Wall Modification 11 3.06
1619068_at CF215954 TC60314 Q94B11 Xyloglucan endotransglycosylase Cell Wall Modification 3 2.78
1612425_at CF371700 TC56348 Q6EP64 Hydroxyproline-rich glycoprotein Cell Wall Modification 11 2.77
1616826_at CB976610 TC54888 Q599J2 β-1,2 Xylosyltransferase Cell Wall Modification 11 2.76
1609138_at CF519079 TC66620 Q16861 Super cysteine rich protein Cell Wall Modification 11 2.74
1617487_at CD720403 TC54500 Q9SFF6 Pectinacetylesterase Cell Wall Modification 2 2.69
1617687_at CB981123 TC57577 Q494P2 Xyloglucan endotransglycosylase 2 Cell Wall Modification 21 2.67
1606832_at CF214798 TC51861 Q7Y223 (1-4)-β-mannan endohydrolase Cell Wall Modification 2 2.58
1617712_at CF607664 TC67150 Q39789 Proline-rich cell wall protein Cell Wall Modification 2 2.52
1617919_at CF605842 TC55276 Q9SHZ2 β-1,3-glucanase Cell Wall Modification 18 2.4
1617015_at CF209172 TC54616 Q7XRM8 Pectate lyase Cell Wall Modification 2 2.34
1618863_at CF208339 TC52953 Q93Y12 α-glucosidase Cell Wall Modification 3 2.28
1617939_s_at CB910883 TC52435 Q41695 Pectinacetylesterase Cell Wall Modification 1 2.28
1616734_at CF405846 TC52115 Q6ZIF8 Pectin-glucuronyltransferase Cell Wall Modification 3 2.28
1607945_at AF243475 - Q9M505 Pectate lyase Cell Wall Modification 2 2.27
1612551_at CF605967 TC63126 Q9M3C5 β-N-acetylhexosaminidase Cell Wall Modification 21 2.26
1622843_s_at CF212102 TC65557 Q9LVC0 Arabinogalactan protein Cell Wall Modification 4 2.25
1611230_at AF159124 - Q9XGT3 β-galactosidase Cell Wall Modification 2 2.25
1619468_at AY043232 TC38735 Q94B16 Pectin methylesterase PME1 Cell Wall Modification 12 2.24
1610118_at CB974025 TC60557 O23562 Glucanase Cell Wall Modification 18 2.21
1614868_at CB920940 TC64720 Q9M0S4 Arabinogalactan protein Cell Wall Modification 5 2.17
1607528_at AY043236 TC61627 Q94B12 Cellulase CEL1 Cell Wall Modification 21 2.11
1614814_s_at CB345895 TC57381 O24136 CP12 precursor Cell Wall Modification 13 2.07