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ProCKSI's Architecture and Workflow. Overview over the workflow and architecture of ProCKSI with its multiple similarity comparison methods: Universal Similarity Metric (USM), Maximum Contact Map Overlap (MaxCMO), and other local and external methods. Currently, these are the DaliLite and TM-align methods, the Combinatorial Extension (CE) of the optimal path, and the FAST Align and Search Tool (FAST).
