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. 2007 Nov 26;28(3):1147–1160. doi: 10.1128/MCB.01771-07

TABLE 1.

Primer sequences used for RT-PCR analyses and ChIP assays

Test Gene Primer sequence
Sense Antisense
RT-PCR analyses
    Mouse semiquantitative SM22α 5′-TCCAGTCCACAAACGACCAAGC-3′ 5′-GAATTGAGCCACCTGTTCCATCTG-3′
        PCR SM-MHC 5′-AGGAAACACCAAGGTCAAGCA-3′ 5′-CCCTGACATGGTGTCCAATC-3′
Myocardin 5′-CCAAACCAAAGGTGAAGAAGCTC-3′ 5′-TGTCTTAACTCTGACACCTTGAG-3′
Runx2 5′-GAGGGCACAAGTTCTATCTG-3′ 5′-CGCTCCGGCCCACAAATCTC-3′
GAPDH 5′-ACCACAGTCCATGCCATCAC-3′ 5′-TCCACCACCCTGTTGCTGTA-3′
    Mouse real-time PCRa SM α-actin 5′-AGTCGCTGTCAGGAACCCTGAGACG-3′ 5′-ATCTTTTCCATGTCGTCCCAGTTG-3′
Myocardin 5′-CAAGGCTTAATACCGCCACTG-3′ 5′-AATGTGCATAGTAACCAGGCTG-3′
GAPDH 5′-AACGACCCCTTCATTGAC-3′ 5′-TCCACGACATACTCAGCAC-3′
    Human semiquantitative SM22α 5′-AACAGCCTGTACCCTGATGG-3′ 5′-ATGACATGCTTTCCCTCCTG-3′
        PCRb SM α-actin 5′-ATGAGGGCTATGCCTTGCCC-3′ 5′-CCCGATGAAGGATGGCTGGA-3′
SM-MHC 5′-GGAGGATGAGATCCTGGTCA-3′ 5′-TGCTTTTCAGCCTTGTTCCT-3′
ALP 5′-GGACATGCAGTACGAGCTGA-3′ 5′-GCAGTGAAGGGCTTCTTGTC-3′
OPN 5′-ATGAGAATTGCAGTGATTTGC-3′ 5′-TTAATTGACCTCAGAAGATGCAC-3′
OSX 5′-ACCTTTCAGCCCCCAAAACCAT-3′ 5′-TTAAGGGGAGCAAAGTCAGAT-3′
Runx2 5′-CGCATTCCTCATCCCAGTAT-3′ 5′-GACTGGCGGGGTGTAAGTAA-3′
ChIP assaysb Human SM22α 5′-CCCTCTCTCCAGCCAGACT-3′ 5′-CCCCAGTGACTCCACACAG-3′
Rat SM-MHC 5′-GTACTGGGGTCCCCATAACG-3′ 5′-TCGAGGTCTGAGCTGGTCCT-3′
Mouse SM-MHC 5′-TCCAGCAGCACCCCGCTTTT-3′ 5′-CCTCTTAGATCTGAGGGCGG-3′
a

The primers for SM22α and SM-MHC are the same as those used in mouse semiquantitative PCR.

b

The primers for GAPDH are as same as the mouse GAPDH sequences used in semiquantitative PCR.