TABLE 1.
Strain or plasmid | Genotypea or relevant characteristics | Endpoints of deletion (strain) or clone (plasmid)b | Source or referencec |
---|---|---|---|
Strains | |||
14028 | Wild-type serovar Typhimurium | ATCCd | |
JS251 | ΔhilA112::Cm | 3019885-3021480 | 19 |
JS252 | ΔhilC113::Cm | 3012135-3012976 | 19 |
JS279 | Φ(hilA-lac+)112 | 19 | |
JS326 | ΔdsbA100::Cm | 4204198-4204820 | 18 |
JS379 | Φ(hilA-lac+)112 ΔdsbA100::Cm | 18 | |
JS563 | ΔhilD119::Km | 3018210-3018730 | |
JS696 | Φ(fliZ′-lac+)8042 | ||
JS739 | ΔrtsA5::Km | 4561755-4560884 | 19 |
JS740 | ΔinvG101 | 3041597-3043282 | |
JS741 | ΔsrgA1::Km | 6670-7315 (plasmid pSLT) | |
JS742 | ΔcpxRA101::Km | 4268376-4270452 | |
JS743 | ΔaraBAD1021::Km | 117190-121300 | |
JS744 | ΔaraE1022::Cm | 3175792-3177395 | |
JS745 | ΔrcsBC101::Km | 2369981-2373608 | |
JS746 | ΔfliZ8042::Tc | 2044136-2044684 | |
JS747 | ΔflgI8043::Cm | 1263345-1264453 | |
JS748 | ΔdsbA100::Cm ΔsrgA1::Km | ||
JS749 | attλ::pDX1::hilA′-lacZ | ||
JS750 | attλ::pDX1::invF′-lacZ | ||
JS751 | attλ::pDX1::sopB′-lacZ | ||
JS752 | attλ::pDX1::sicA′-lacZ | ||
JS753 | attλ::pDX1::prgH′-lacZ | ||
JS754 | ΔdsbA100::Cm attλ::pDX1::hilA′-lacZ | ||
JS755 | ΔdsbA100::Cm attλ::pDX1::invF′-lacZ | ||
JS756 | ΔdsbA100::Cm attλ::pDX1::sicA′-lacZ | ||
JS757 | ΔdsbA100::Cm attλ::pDX1::sopB′-lacZ | ||
JS758 | ΔdsbA100::Cm attλ::pDX1::prgH′-lacZ | ||
JS759 | ΔsrgA1::Km attλ::pDX1::hilA′-lacZ | ||
JS760 | ΔsrgA1::Km attλ::pDX1::sopB′-lacZ | ||
JS761 | ΔdsbA100::Cm ΔsrgA1::Km attλ::pDX1::hilA′-lacZ | ||
JS762 | ΔdsbA100::Cm ΔsrgA1::Km attλ::pDX1::sopB′-lacZ | ||
JS763 | ΔcpxRA101::Km attλ::pDX1::hilA′-lacZ | ||
JS765 | ΔcpxRA101::Km ΔdsbA100::Cm attλ::pDX1::hilA′-lacZ | ||
JS767 | ΔinvG101 attλ::pDX1::hilA′-lacZ | ||
JS768 | ΔinvG101 attλ::pDX1::invF′-lacZ | ||
JS769 | ΔinvG101 attλ::pDX1::sicA′-lacZ | ||
JS770 | ΔinvG101 attλ::pDX1::sopB′-lacZ | ||
JS771 | ΔinvG101 ΔdsbA100::Cm attλ::pDX1::hilA′-lacZ | ||
JS772 | ΔinvG101 ΔdsbA100::Cm attλ::pDX1::invF′-lacZ | ||
JS773 | ΔinvG101 ΔdsbA100::Cm attλ::pDX1::sicA′-lacZ | ||
JS774 | ΔinvG101 ΔdsbA100::Cm attλ::pDX1::sopB′-lacZ | ||
JS775 | ΔrcsBC101 attλ::pDX1::hilA′-lacZ | ||
JS776 | ΔrcsBC101 ΔdsbA100::Cm attλ::pDX1::hilA′-lacZ | ||
JS777 | ΔrcsBC101 ΔdsbA100::Cm ΔsrgA1::Km attλ::pDX1::hilA′-lacZ | ||
JS778 | ΔfliZ8042::Tc attλ::pDX1::hilA′-lacZ | ||
JS779 | ΔdsbA100 ΔsrgA1 attλ::pDX1::hilA′-lacZ | ||
JS780 | ΔfliZ8042::Tc ΔdsbA100 attλ::pDX1::hilA′-lacZ | ||
JS781 | ΔfliZ8042::Tc ΔdsbA100 ΔsrgA1 attλ::pDX1::hilA′-lacZ | ||
JS782 | ΔrcsBC101::Km ΔfliZ8042::Tc attλ::pDX1::hilA′-lacZ | ||
JS783 | ΔrcsBC101::Km ΔfliZ8042::Tc ΔdsbA100 attλ::pDX1::hilA′-lacZ | ||
JS784 | ΔrcsBC101::Km ΔfliZ8042::Tc ΔdsbA100 ΔsrgA1 attλ::pDX1::hilA′-lacZ | ||
JS785 | ΔdsbA100 Φ(fliZ′-lac+)8042 | ||
JS787 | ΔrcsBC101::Cm Φ(fliZ′-lac+)8042 | ||
JS788 | ΔrcsBC101::Cm ΔdsbA100 Φ(fliZ′-lac+)8042 | ||
JS790 | ΔflgI8043::Cm attλ::pDX1::hilA′-lacZ | ||
JS791 | ΔflgI8043::Cm Φ(fliZ′-lac+)8042 | ||
JS792 | ΔrcsBC101::Cm attλ::pDX1::hilA′-lacZ | ||
JS793 | ΔflgI8043::Cm ΔrcsBC101 attλ::pDX1::hilA′-lacZ | ||
JS794 | ΔrcsBC101 Φ(fliZ′-lac+)8042 | ||
JS795 | ΔflgI8043::Cm ΔrcsBC101 Φ(fliZ′-lac+)8042 | ||
JS796 | ΔflgI8043::Cm ΔrcsBC101 ΔdsbA100 attλ::pDX1::hilA′-lacZ | ||
JS797 | ΔflgI8043::Cm ΔrcsBC101 ΔdsbA100 Φ(fliZ′-lac+)8042 | ||
JS798 | pWKS30 attλ::pDX1::hilA′-lacZ | ||
JS799 | pFliZ attλ::pDX1::hilA′-lacZ | ||
JS800 | pWKS30 ΔfliZ8042::Tc attλ::pDX1::hilA′-lacZ | ||
JS801 | pWKS30 ΔhilD114::Km attλ::pDX1::hilA′-lacZ | ||
JS802 | pWKS30 ΔrtsA5::Km attλ::pDX1::hilA′-lacZ | ||
JS803 | pWKS30 ΔhilC113::Cm attλ::pDX1::hilA′-lacZ | ||
JS804 | pFliZ ΔfliZ8042::Tc attλ::pDX1::hilA′-lacZ | ||
JS805 | pFliZ ΔhilD114::Km attλ::pDX1::hilA′-lacZ | ||
JS806 | pFliZ ΔrtsA5::Km attλ::pDX1::hilA′-lacZ | ||
JS807 | pFliZ ΔhilC113::Cm attλ::pDX1::hilA′-lacZ | ||
JS808 | ΔhilD114::Km attλ::pDX1::hilA′-lacZ | ||
JS809 | ΔrcsBC101::Cm ΔhilD114::Km attλ::pDX1::hilA′-lacZ | ||
JS810 | ΔdsbA100::Cm ΔinvG101 | ||
JS811 | pHilA pLacY(A177C) ΔaraBAD1021 ΔaraE1022 attλ::pDX1::sopB′-lacZ | ||
JS812 | pHilA ΔhilD114::Km pLacY(A177C) ΔaraBAD1021 ΔaraE1022 attλ::pDX1::sopB′-lacZ | ||
JS813 | pHilA ΔhilD114::Km ΔdsbA100 pLacY(A177C) ΔaraBAD1021 ΔaraE1022 attλ::pDX1::sopB′-lacZ | ||
JS816 | pWKS30 ΔfliZ8042::Tc ΔdsbA100::Cm attλ::pDX1::hilA′-lacZ | ||
JS817 | pWKS30 ΔfliZ8042::Tc ΔdsbA100 ΔsrgA1 attλ::pDX1::hilA′-lacZ | ||
JS818 | pWKS30 ΔfliZ8042::Tc ΔrcsBC101::Km attλ::pDX1::hilA′-lacZ | ||
JS819 | pWKS30 ΔfliZ8042::Tc ΔrcsBC101::Km ΔdsbA100::Cm attλ::pDX1::hilA′-lacZ | ||
JS820 | pWKS30 ΔfliZ8042::Tc ΔrcsBC101::Km ΔdsbA100 ΔsrgA1 attλ::pDX1::hilA′-lacZ | ||
JS821 | pFliZ ΔfliZ8042::Tc ΔdsbA100::Cm attλ::pDX1::hilA′-lacZ | ||
JS822 | pFliZ ΔfliZ8042::Tc ΔdsbA100 ΔsrgA1 attλ::pDX1::hilA′-lacZ | ||
JS823 | pFliZ ΔfliZ8042::Tc ΔrcsBC101::Km attλ::pDX1::hilA′-lacZ | ||
JS824 | pFliZ ΔfliZ8042::Tc ΔrcsBC101::Km ΔdsbA100::Cm attλ::pDX1::hilA′-lacZ | ||
JS825 | pFliZ ΔfliZ8042::Tc ΔrcsBC101::Km ΔdsbA100 ΔsrgA1 attλ::pDX1::hilA′-lacZ | ||
JS826 | ΔflgI8043::Cm ΔdsbA100 attλ::pDX1::hilA′-lacZ | ||
JS827 | ΔflgI8043::Cm ΔdsbA100 Φ(fliZ′-lac+)8042 | ||
JS828 | ΔhilA112 attλ::pDX1::hilA′-lacZ | ||
JS829 | ΔhilA112 ΔdsbA100::Cm attλ::pDX1::hilA′-lacZ | ||
Plasmids | |||
pKD46 | bla PBADgam bet exo pSC101 oriTS | 13 | |
pCP20 | bla cat cI857 λPRflp pSC101 oriTS | 7 | |
pAH125 | lacZ tL3 λattP oriR6K Kan tmgB | 29 | |
pLacY(A177C) | 49 | ||
pDX1 | lacZ tL3 λattP oriR6K aacIV tmgB | ||
pWKS30 | pSC101 ori; Apr | 63 | |
pDX2 | pWKS30::fliZ+ | 2044118-2044703 | |
pBAD33 | cat araC PBAD pACYC184 ori | 27 | |
pDX3 | pBAD33::hilA+ | 3019828-3021526 |
All Salmonella strains are isogenic derivatives of serovar Typhimurium strain 14028.
Numbers indicate the base pairs that are deleted or cloned (inclusive) as defined in the S. enterica serovar Typhimurium LT2 genome sequence (National Center for Biotechnology Information).
This study unless specified otherwise.
ATCC, American Type Culture Collection.