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. 2007 Nov 14;82(2):674–682. doi: 10.1128/JVI.00935-07

TABLE 1.

Residues related to intermolecular contacts

Interaction location Interaction in:
Residue 1 Residue 2
Contact I
    H bond O Created by potrace 1.16, written by Peter Selinger 2001-2019 of Ser2 Side chain of Glu243
    Salt bridge Side chain of Arg7 Side chain of Asp256
    H bond —NH2 of Lys17 O Created by potrace 1.16, written by Peter Selinger 2001-2019 of Met262
Contact II
    H bond Side chain of Ser340 Side chain of Lys388
    H bond —NH— of Asp343 Side chain of Ser326
    Hydrophobic Side chain of leu344 Surface pocket
    H bond —NH— of Ala345 O Created by potrace 1.16, written by Peter Selinger 2001-2019 of Leu250
    Hydrophobic Side chain of Phe348 Surface pocket
    Hydrophobic Side chain of Lys354 Side chain of Leu379
Contact III
    H bond —NH— of Lys6 O Created by potrace 1.16, written by Peter Selinger 2001-2019 of Cys349
    H bond O Created by potrace 1.16, written by Peter Selinger 2001-2019 of Lys6 —NH— of Cys349
    H bond —NH— of Ile8 O Created by potrace 1.16, written by Peter Selinger 2001-2019 of Gln347