Table 2.
Representative upregulated genes (out of 259 total).
| Probe ID | Fold Change | Common | Genbank | Description |
| Upregulated genes | ||||
| GE53598 | 5.88 | TINAG | NM_014464 | tubulointerstitial nephritis antigen, complete cds |
| GE59642 | 5.77 | CXCL10 | NM_001565 | gamma-interferon inducible early response gene (with homology to platelet proteins) |
| GE57550 | 4.74 | CRYM | NM_001888 | mu-crystallin mRNA, complete cds |
| GE518123 | 4.27 | IGLL1 | NM_020070 | immunoglobulin lambda-like polypeptide 1 (IGLL1), transcript variant 1, mRNA |
| GE58736 | 4.20 | DACT1 | NM_016651 | dapper homolog 1, antagonist of beta-catenin (xenopus) (DACT1), mRNA |
| GE79033 | 4.15 | CD9 | NM_001769 | CD9 antigen (p24) (CD9), mRNA |
| GE55346 | 3.57 | LRRC16 | NM_017640 | leucine rich repeat containing 16 (LRRC16), mRNA |
| GE61239 | 3.50 | SERPINB1 | NM_030666 | serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 1 (SERPINB1), mRNA |
| GE62781 | 3.50 | MT1F | NM_005949 | metallothionein 1F (functional) (MT1F), mRNA |
| GE87501 | 3.49 | FXYD2 | NM_001680 | FXYD domain containing ion transport regulator 2 (FXYD2), transcript variant a, mRNA |
| GE61946 | 3.26 | ARHGAP6 | NM_001174 | Rho GTPase activating protein 6 (ARHGAP6), transcript variant 2, mRNA |
| GE56932 | 3.22 | EGLN3 | NM_022073 | egl nine homolog 3 (C. elegans) (EGLN3), mRNA |
| GE61093 | 3.18 | ACTN1 | NM_001102 | actinin, alpha 1 (ACTN1), mRNA |
| GE87626 | 2.97 | OSR2 | NM_053001 | odd-skipped-related 2A protein (OSR2), mRNA |
| GE59655 | 2.93 | ATP1B1 | NM_001677 | ATPase, Na+/K+ transporting, beta 1 polypeptide (ATP1B1), mRNA |
| GE58575 | 2.91 | PTPLA | NM_014241 | protein tyrosine phosphatase-like (proline instead of catalytic arginine), member a (PTPLA), mRNA |
| GE57767 | 2.84 | COL9A3 | NM_001853 | collagen, type IX, alpha 3 (COL9A3), mRNA |
| GE57621 | 2.83 | LGALS3BP | NM_005567 | lectin, galactoside-binding, soluble, 3 binding protein (LGALS3BP), mRNA |
| GE81389 | 2.82 | CCR6 | NM_004367 | chemokine (C-C motif) receptor 6 (CCR6), transcript variant 1, mRNA |
| GE79898 | 2.81 | LYPLA3 | NM_012320 | lysophospholipase 3 (lysosomal phospholipase A2) (LYPLA3), mRNA |
| GE62292 | 2.79 | CPXM | NM_019609 | carboxypeptidase X (M14 family) (CPXM), mRNA |
| GE57547 | 2.66 | TCN2 | NM_000355 | transcobalamin II; macrocytic anemia (TCN2), mRNA |
| GE81525 | 2.52 | IFI27 | NM_005532 | ISG12 protein |
| GE79641 | 2.48 | FUT4 | NM_002033 | fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific) (FUT4), mRNA |
| GE81272 | 2.47 | VIM | NM_003380 | vimentin (VIM), mRNA |
| GE57737 | 2.45 | ENPP2 | NM_006209 | autotaxin mRNA, complete cds |
| GE80150 | 2.38 | ELF3 | NM_004433 | E74-like factor 3 (ets domain transcription factor, epithelial-specific) (ELF3), mRNA |
| GE58207 | 2.34 | ENG | NM_000118 | endoglin (Osler-Rendu-Weber syndrome 1) (ENG), mRNA |
| GE57048 | 2.33 | CCR1 | NM_001295 | chemokine (C-C motif) receptor 1 (CCR1), mRNA |
| GE57883 | 2.28 | SELL | NM_000655 | selectin L (lymphocyte adhesion molecule 1) (SELL), mRNA |
| GE60214 | 2.27 | NRGN | NM_006176 | neurogranin (protein kinase C substrate, RC3) (NRGN), mRNA |
| GE498904 | 2.22 | DACT1 | NM_016651 | dapper homolog 1, antagonist of beta-catenin (xenopus) (DACT1), mRNA |
| GE81340 | 2.17 | PSTPIP1 | NM_003978 | proline-serine-threonine phosphatase interacting protein 1 (PSTPIP1), mRNA |
| GE58931 | 2.16 | TCF8 | U12170 | zinc finger homeodomain protein mRNA, complete cds |
| GE61464 | 2.15 | SERPINB9 | NM_004155 | serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 9 (SERPINB9), mRNA |
| GE82947 | 2.12 | SNX22 | NM_024798 | sorting nexin 22 (SNX22), mRNA |
| GE60134 | 2.09 | UPP1 | NM_003364 | uridine phosphorylase (UP), transcript variant 1, mRNA |
| GE54152 | 2.07 | APOL1 | NM_003661 | apolipoprotein L, 1 (APOL1), transcript variant 1, mRNA |
| GE56786 | 2.02 | DUSP4 | NM_001394 | dual specificity phosphatase 4 (DUSP4), transcript variant 1, mRNA |
| GE54528 | 2.02 | TNFSF12; | NM_003809 | tumor necrosis factor (ligand) superfamily, member 12 (TNFSF12), transcript variant 1, mRNA |
| GE61789 | 2.02 | TDE2L | NM_178865 | tumor differentially expressed protein 2 (TDE2), mRNA |
| GE61399 | 2.01 | LLT1 | NM_013269 | lectin-like NK cell receptor (LLT1), mRNA |
Fold change = diseased/normal