Table 2.
Genome | Chi sequence | Nr. occurrences |
E. coli | 5'-GCTGGTGG-3' | 761 |
oriC – 3,923,500 (bp) | ||
terC – 1,588,800 (bp) | ||
H. influenzae | 5'-GGTGGTGG-3' | 77 |
oriC – 603,000 (bp) | 5'-GCTGGTGG-3' | 56 |
terC – 1,518,000 (bp) | 5'-GTTGGTGG-3' | 63 |
5'-GNTGGTGG-3' | 5'-GATGGTGG-3' | 28 |
5'-GSTGGAGG-3' | 5'-GGTGGAGG-3' | 11 |
5'-GCTGGAGG-3' | 7 |
The number of occurrences of Chi motifs in the genomes shows that they are overrepresented in E. coli (761 occurrences) but not in H. influenzae (maximum of 77 occurrences).