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. 2007 Nov 5;36(Database issue):D276–D280. doi: 10.1093/nar/gkm879

Table 1.

Wall-clock timings for query BRCA1_HUMAN

Search method E-value threshold Source database Matches Seconds
BLAST 1 NRDB100 3343 7
BLAST 0.001 NRDB100 1697 4
BLAST 1 NRDB90 1604 1
PSI-BLAST 1 NRDB100 3298 8
PSI-BLAST 0.001 NRDB100 1697 4
PSI-BLAST 1 NRDB40 705 1