Table 4.
Block Length | PDB ID | Name | Reference |
14 (×2) | 1EZV | Mitochondrial cytochrome b subunit (S. cerevisiae) | Hunte et al. 2000 |
14 | 1PF4 | Multidrug resistance ABC transporter MsbA (V. cholerae) | Chang 2003 |
14 | 1FFT | Cytochrome O ubiquinol oxidase, subunit II (E. coli) | Abramson et al. 2000 |
14 | 1OCR | Mitochondrial cytochrome c oxidase, subunit I (B. taurus) | Yoshikawa et al. 1998 |
14 +15 | 1EHK | Bacterial ba3 type cytochrome c oxidase subunit I (T. thermophilus) | Soulimane et al. 2000 |
16 | 1MSL | Gated mechanosensitive channel (M. tuberculosis) | Chang et al. 1998 |
16 | 1JBO | Subunit XII of photosystem I reaction centre, PsaM (S. elongatus) | Jordan et al. 2001 |
16 | 1M56 | Bacterial aa3 type cytochrome c oxidase subunit IV (R. sphaeroides) | Svensson-Ek et al. 2002 |
The table shows proteins with hydrophobic blocks of at least 14 amino acids, describes the structural nature of the run, and provides a reference to the structure in question. All long hydrophobic runs listed are parts of transmembrane helices, with the possible exception of the length 14 block of 1PF4, which was in a portion of sequence absent from the solved structure.