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. 2007 Nov 28;8:437. doi: 10.1186/1471-2164-8-437

Table 11.

Genes encoding ureohydrolases in the investigated cyanobacterial marine and freshwater cyanobacteria.

Strain Database entry* AA MM (kDa) pI
Marine species

Prochlorococcus marinus SS 120 Pro1849 303 33.6 6.32
Prochlorococcus marinus str. MIT 9211 P9211_09067 296 32.7 6.45
Prochlorococcus marinus MIT 9312 PMT9312_1779 293 32.6 5.38
Prochlorococcus marinus MIT 9313 PMT2214 304 32.8 5.55
Prochlorococcus marinus MED 4 PMM1686 294 32.6 5.13
Prochlorococcus marinus NATL 2A PMN2A_1287 299 32.9 5.01
Synechococcus sp. CC 9605 Syncc9605_1082
Syncc9605_2591
396
291
43.8
31.3
5.03
4.91
Synechococcus sp. CC 9902 Syncc9902_2230 287 30.8 5.10
Synechococcus sp. WH 8102 SYNW1412
SYNW2422
426
286
46.8
30.4
5.48
4.68
Synechococcus sp. WH 7805 WH7805_06086
WH7805_09974
492
294
53.8
31.5
4.48
4.96
Synechococcus sp. WH 5701 WH5701_03860
WH5701_03684
401
308
44.1
32.6
5.35
4.96
Synechococcus sp. RS 9917 RS9917_06190 286 30.9 5.06
Crocosphaera watsonii WH 8501 n.d. n.d. n.d. n.d.
Trichodesmium erythraeum IMS 101 Tery_3780 303 34.0 4.80

Freshwater species

Synechococcus elongatus sp. PCC 6301 n.d. n.d. n.d. n.d.
Synechococcus elongatus sp. PCC 7942 n.d. n.d. n.d. n.d.
Synechococcus Yellowstone sp. JA-3-3-AB CYA_0859 301 33.1 5.51
Synechococcus Yellowstone sp. JA-2-3Bα (2–13) CYB_1744 307 33.7 5.23
Thermosynechococcus elongatus BP-1 n.d. n.d. n.d. n.d.
Synechocystis sp. PCC 6803 Sll1077
Sll0228
390
306
42.9
33.5
5.06
4.90
Gloeobacter violaceus PCC 7421 n.d. n.d. n.d. n.d.
Nostoc sp. PCC 7120 Alr2310 346 38.6 4.69
Nostoc punctiforme PCC 73102 Npun02002114 347 38.5 4.53
Anabaena variabilis ATCC 29413 Ava_0127 346 38.5 4.66

N.d. = not detected. *These ureohydrolases are annotated as arginases, as agmatinases as well as 4-guanidino butyrases. The (+) in Table 3 for A2.1, B1, and E2 refers to an identical gene, because the gene annotation does not distinguish between arginases, agmatinases, and 4-guanidino butyrases. A classification is only possible in a few cases, in which enzymatic activity has been measured or the similarity values are very high to already biochemically well-characterized enzymes (see text for details).