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. Author manuscript; available in PMC: 2008 Dec 1.
Published in final edited form as: J Virol Methods. 2007 Jul 19;146(1-2):22–28. doi: 10.1016/j.jviromet.2007.05.029

Table 1.

The best-fit line when the relative amount of PAV template in the standard sample was regressed onto PAV as a proportion of the total peak area or height [PAV / (PAV + PAS)] at five nucleotide sites that differentiate PAV and PAS.

Sitea templateb peak
measurement
Function
2074 area - 0.097 + 15.95 area - 6.73 area2
RNA height 0.13 + 25.53 height - 31.9 height2 + 15.5 height3
area - 0.006 + 15.24 area - 5.75 area2
DNA height - 0.27 + 23.6 height - 29.3 height2 + 16.22 height3
2080 area - 0.33 + 9.63 area
RNA height - 0.021 + 9.6 height
area - 0.46 + 15.26 area - 5.96 area2
DNA height - 1.14 + 14 height - 3.23 height2
2083 area 1.6 + 8.05 area
RNA height 0.49 + 9.25 height
area - 0.19 + 9.049 area
DNA height - 0.82 + 10.83 height
2086 area 5.92 - 20.92 area + 23.96 area2
RNA height 9.34 height 2.136
area - 1.45 + 19.45 height - 46.86 area2 + 37.7 area3
DNA height 3.96 - 17.24 height + 22.06 height2
2088 area 1.95 + 11 area − 3.6 area2
RNA height - 3.1 + 37.9 height - 47.08 height2 + 22.12 height3
area 1.95 + 11 area - 3.6 area2
DNA height - 0.12 + 41.8 height - 77.32 height2 + 47 height3
a

complete genome of PAV-Aus (M21347) used as the reference sequence;

b

standard curves were created by mixing in vitro transcribed viral RNA or RT-PCR products in ratios from (1:9 to 9:1 PAV:PAS).