TABLE 2.
Position | Amino acid in strain
|
||
---|---|---|---|
5VD | 5B | Onderstepoort | |
21 | S | —a | T |
30 | Q | — | H |
56 | A | — | T |
61 | R | — | H |
68 | V | — | M |
71 | G | — | S |
76 | D | — | E |
78 | L | — | M |
89 | M | — | I |
146 | I | — | V |
155 | D | — | E |
156 | A | — | S |
159 | V | — | I |
162 | S | — | A |
180 | G | — | S |
186 | Y | — | H |
197 | R | — | K |
212 | K | — | R |
218 | S | — | N |
238 | Y | — | D |
247 | K | — | E |
298 | D | — | E |
309 | N | — | S |
314 | S | — | G |
324 | G | — | W |
329 | N | — | D |
330 | Q | — | H |
331 | V | — | I |
342 | V | — | M |
344 | R | — | K |
358 | V | — | I |
367 | V | — | A |
370 | Q | — | K |
373 | G | — | E |
376 | N | — | G |
386 | S | — | T |
401 | V | — | R |
417 | I | — | V |
442 | N | — | S |
446 | D | — | N |
460 | L | — | V |
467 | S | — | G |
475 | T | — | L |
484 | R | — | W |
500 | M | — | I |
502 | K | — | R |
506 | T | — | I |
510 | L | — | I |
517 | N | — | S |
522 | V | — | I |
530 | E | K | S |
531 | N | — | D |
548 | T | M | T |
549 | Y | — | H |
572 | D | — | N |
583 | S | — | A |
586 | T | — | A |
594 | D | — | N |
605b | S | — | |
606 | K | — | |
607 | P | — |
—, identity with the corresponding amino acid residue in the 5VD strain.
The three residues at the C terminus (positions 605 to 607) are missing in the H protein of the Onderstepoort strain.