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. 2007 Oct 5;8(10):R211. doi: 10.1186/gb-2007-8-10-r211

Table 4.

H. glycines probesets orthologous to C. elegans collagens

H. glycines probeset C. elegans collagen E-value, score, % identity (BLASTX)** E-value, score, % identity (TBLASTN)**
HgAffx.10090.1.S1_at* CE06699 2e-25, 105, 59% 3e-24, 105, 59%
CE05938 2e-25, 105, 59% 2e-25, 109, 57%
CE05937 2e-25, 105, 59% 2e-25, 109, 57%
HgAffx.10017.1.S1_at CE05147 1e-25, 106, 51% 2e-40, 159, 39%
HgAffx.18987.1.S1_at CE32085 3e-32, 127, 66% 1e-30, 127, 66%
HgAffx.19573.1.S1_at CE02380 4e-26, 108, 65% 4e-27, 115, 62%
HgAffx.19987.1.S1_at CE02380 9e-30, 119, 62% 2e-28, 119, 62%
HgAffx.241.1.S1_at CE29723 3e-32, 127, 56% 3e-32, 132, 52%
HgAffx.241.1.A1_at CE29723 3e-32, 127, 58% 3e-32, 132, 52%
HgAffx.7962.1.S1_at* CE04335 5e-82, 293, 69% 2e-87, 318, 85%
CE04334 5e-82, 293, 69% 2e-87, 318, 85%

*Probeset matched several C. elegans collagens equally well.

**BLASTX of H. glycines nucleotide probesets against C. elegans collagen proteins and TBLASTN of C. elegans collagen proteins against H. glycines nucleotide probesets.