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. 2007 Oct 24;8(10):R225. doi: 10.1186/gb-2007-8-10-r225

Table 4.

Estimated parameter values for the exponential model of RTR and InDel rate

Model for mean Model for median


TFBS name a b a b
E2F -0.216 0.226 -0.181 0.184
Myc -0.252 0.252 -0.265 0.265
NFκB -0.072 0.072 -0.035 0.035

Simulation results suggested that the TFBS RTR can be modeled by an exponential function of InDel rates given in equation 5. The values for parameters a and b were estimated from observed mean and median values of RTRs at different InDel rates.