Table 1.
Clone | Base | Base substitution | Position | AA position | PCR conditions | AA substitution | |
First round (from wild-type VAC) | |||||||
M1 | 808 | T → A | 1 | } | 270 | 1 | F → M |
810 | T → G | 3 | |||||
M2 | 643 | G → T | 1 | } | 215 | 1 | A → Y |
644 | C → A | 2 | |||||
645 | G → C | 3 | |||||
M3 | 1246 | G → T | 1 | 416 | 1 | D → Y | |
M4 | 1246 | G → T | 1 | 416 | 1 | D → Y | |
1249 | C → T | 1 | } | 417 | H → Y | ||
1251 | C → T | 3 | |||||
Second round (from M4 variant) | |||||||
M5 | 130 | A → G | 1 | 44 | 2 | I → V | |
145 | G → T | 1 | 49 | E → stop | |||
315 | C → T | 3 | 105 | Silent | |||
1246 | G → T | 1 | 416 | D → Y | |||
1249 | C → T | 1 | } | 417 | H → Y | ||
1251 | C → T | 3 | |||||
M6 | 64 | T → C | 1 | 22 | 2 | S → P | |
147 | A → G | 3 | 49 | Silent | |||
1180 | A → C | 1 | 394 | T → P | |||
1246 | G → T | 1 | 416 | D → Y | |||
1249 | C → T | 1 | } | 417 | H → Y | ||
1251 | C → T | 3 | |||||
Third round (from M2 variant) | |||||||
M7 | 266 | A → C | 2 | 89 | 2 | E → A | |
643 | G → T | 1 | } | 215 | |||
644 | C → A | 2 | A → Y | ||||
645 | G → C | 3 | |||||
M8 | 643 | G → T | 1 | } | 215 | 2 | |
644 | C → A | 2 | A → Y | ||||
645 | G → C | 3 | |||||
809 | T → C | 2 | 270 | F → S |
The amino acid numbering refers to the sequence of the starting acylase (Aramori et al. 1991); see also Figure 1 ▶.