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. 2007 Nov 13;8(11):R240. doi: 10.1186/gb-2007-8-11-r240

Table 4.

Gene ontologies for up-regulated processes in BCs versus leukocytes

Gene category List hits EASE score
Development (developmental) 178 6.39E-09
Morphogenesis (developmental) 116 1.98E-08
Organogenesis (developmental) 105 5.04E-08
Cellular process 482 6.48E-08
Cell communication 257 4.78E-07
Cell adhesion 68 4.05E-06
Skeletal development (developmental) 25 4.44E-06
Cell-cell signaling 64 4.86E-06
Ion transport 62 8.10E-05
Circulation 20 9.47E-05
Metal ion transport 38 2.53E-04
Cartilage condensation 6 3.56E-04
Cation transport 46 5.97E-04
G-protein coupled receptor protein signaling pathway 61 8.03E-04
Regulation of blood pressure 9 9.06E-04
Neurogenesis (neuronal) 46 1.17E-03
Second-messenger-mediated signaling 19 1.32E-03
Cell surface receptor linked signal transduction 93 1.52E-03
Bone remodeling 9 2.01E-03
Ossification 9 2.01E-03
Cell homeostasis 15 2.07E-03
Cell ion homeostasis 14 2.27E-03
Ion homeostasis 14 2.27E-03
Transition metal ion transport 9 2.40E-03
Transport 151 2.97E-03
Homeostasis 15 3.10E-03
Transition metal ion homeostasis 7 3.37E-03
Receptor mediated endocytosis 7 4.20E-03
Metal ion homeostasis 11 4.48E-03
Homophilic cell adhesion 15 5.91E-03
Di-, tri-valent inorganic cation homeostasis 10 6.86E-03
Gas transport (erythrocytic) 5 7.51E-03
Oxygen transport (erythrocytic) 5 7.51E-03
Cation homeostasis 12 8.76E-03
Angiogenesis (blood vessel development) 8 1.10E-02
Cyclic-nucleotide-mediated signaling 15 1.13E-02
Transmission of nerve impulse (neurophysiology) 27 1.16E-02
Monovalent inorganic cation transport 28 1.19E-02
Di-, tri-valent inorganic cation transport 14 1.42E-02
Enzyme linked receptor protein signaling pathway 21 1.42E-02
Synaptic transmission (neurophysiology) 26 1.42E-02
Blood vessel development (blood vessel development) 8 1.44E-02
Iron ion homeostasis 5 1.64E-02
Blood coagulation (coagulation) 13 1.80E-02
Tyrosine kinase signaling pathway 15 1.99E-02
Signal transduction 177 2.18E-02
Potassium ion transport 17 2.47E-02
Hemostasis 13 2.77E-02
Pregnancy 8 2.89E-02
Axon guidance (neurophysiology) 6 4.00E-02

When these genes were clustered based on their GO, we identified processes involved in development, nervous system development, blood vessel development and angiogenesis, and erythrocytes.