TABLE 1.
Primers used in this study
| Primer (sense) | Sequence (5′ to 3′) |
|---|---|
| ak233 (+) | GCAAGAGTTTTGCTTATGTTAGCAG |
| ak234 (+) | GAAATGGGCAGAGTGTATTCTCCG |
| ak235 (+) | GTGCGGATAATGTTGTTTCTG |
| AR42 (+) | CGGGATCCCTCGGCGGTGTTCCTTTCCAAG |
| AR43 (−) | CGGGATCCCGCCCTTTAGTTCCTAAAGGG |
| AR48 (+) | TCCCCCGGGGATAAACCCAGCGAAC |
| AR49 (−) | TCCCCCGGGAAGCTTTCTAGACATCTAAATC |
| AR51 (−) | GCTCTAGATTAAGCTTTTTTGATGATTATTTC |
| AR56 (−) | CATCCTCTTCGTCTTGGTAGC |
| AR66 (+) | GCTCTAGAGCCGAAGTTAACAATACTG |
| cftF (+) | GAGTTCTTGGTGCTATGAAAACAG |
| cftR (−) | TCTTGAAGCTCTACATGAGAATCTG |
| Cj0264cF (+) | TCTTAAATGCTCTGGGTACAG |
| Cj0264cR (−) | GTAAGTAAGTGGAAAGGTGCTTC |
| Cj0265cF (+) | GCCTATACCGATGAAGTTGTATC |
| Cj0265cR (−) | CACAGAAGGTGCTTTAGGATTTAC |
| Cj0358F (+) | GAAAGAACTTTGATCACTCCATCTC |
| Cj0358R (−) | CCACCTAAATTCACACCATTATGAC |
| Cj0414F (+) | CTGTTTTAAAGGCAGCAGAACTTAC |
| Cj0414R (−) | CTTCTCCTTGCTCATCTTTAGG |
| Cj0448cF (+) | GGAACATTGCATAGAAGTGTAGATG |
| Cj0448cR (−) | CTAGTTTTCTTACTTCATCGGCAAC |
| clpBA (+) | GGAAGATCTCAAACCTTGAAAGTGCAGCAT |
| clpBB (−) | GGAAGATCTAGCACCAAAATCAGGGTCAA |
| clpBC (−) | CGCGGATCCTTTTCCTACGCCTGGTTCAC |
| clpBD (+) | CGCGGATCCAGGGCTTAATGCGGACAATA |
| clpBF (+) | AAGCCGTACGAAGAAAACCTTATAG |
| clpBR (−) | AATCCACTGTTACACCTTTGCTATC |
| dapBF (+) | TAAGTGGAAGAGATGGCATTATAGG |
| dapBR (−) | CCTTGAAGTAGCGGTATGATTAAG |
| glyAF (+) | CTAGTGCTTATGCAAGAGTGATTG |
| glyAR (−) | AGCTTACTACATGAGCGTATGG |
| grpEF (+) | GCTTTAGAAGCAGCTGTTAATG |
| grpER (−) | CATCTTTGATAAGAGCCACTCC |
| hrcAF (+) | GCTATAGAAGCAATGAAGAAAGAGC |
| hrcAR (−) | ACCTTAAGCCCCATAAAACCTTC |
| katAF (+) | CTTTAGTCCAAGCAATATCGTTCC |
| katAR (−) | CAGCGACATTGTAAGTATTCACTTC |
| lpxCF (+) | CTCCTGTTATGGATGGATCAAG |
| lpxCR (−) | GGGGTTCTTTAGTAGGAGTTAAACG |
| metCF (+) | CTAAACTTATTCATTGTGGCAGAGG |
| metCR (−) | CTCTGTATTTTTCCAAGTTGCGTG |
| sdhAF (+) | GTGGGGCTCATACTAGAGAAG |
| sdhAR (−) | TACTCTCCTTCCATCAAGTGAAAAC |