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. 2007 Dec 21;4:50. doi: 10.1186/1742-4682-4-50

Table 2.

Kinetic parameters. Concentrations and the Michaelis-Menten constants (K4, K8, and K11-K19) are given in [nM]. First- and second-order rate constants are given in [s-1] and [nM-1·s-1], respectively. V4, V8, and V11-V19 are expressed in [nM·s-1].

Reaction number Equation Kinetic parameter Reference
v1 k1·X1·X2 - k-1·X3 k1 = 0.003 k-1 = 0.06 [11]
v2 k2·X3·X3 - k-2·X4 k2 = 0.01 k-2 = 0.1 [11]
v3 k3·X4 - k-3·X5 k3 = 1 k-3 = 0.01 [11]
v4 V4·X5/(K4 + X5) V4 = 450 K4 = 50 [11]
v5 k5·X5·X6 - k-5·X7 k5 = 0.06 k-5 = 0.2 [11]
v6 k6·X7 - k-6·X8 k6 = 1 k-6 = 0.05 [11]
v7 k7·X8 - k-7·X5·X9 k7 = 0.3 k-7 = 0.006 [11]
v8 V8·X9/(K8 + X9) V8 = 1 K8 = 100 [11]
v9 k9·X9 - k-9·X10 k9 = 1 k-9 = 0.03 [11]
v10 k10·X9·X11 - k-10·X12 k10 = 0.214 k-10 = 5.25 Estimate
v11 V11·X12·X13/(K11 + X13) V11 = 4 K11 = 64 [39]
v12 V12·X14·X15/[K12·(1 + X16/K14) + X15] V12 = 3.5 K12 = 317 [14]
v13 V13·X16/[K13·(1 + X17/K15) + X16] V13 = 0.058 K13 = 2200 [12]
v14 V14·X14·X16/[K14·(1 + X15/K12) + X16] V14 = 2.9 K14 = 317 [12]
v15 V15·X17/[K15·(1 + X16/K13) + X17] V15 = 0.058 K15 = 60 [12]
v16 V16·X17·X18/[K16·(1 + X19/K18) + X18] V16 = 9.5 K16 = 1.46 × 105 [12]
v17 V17·X19/[K17·(1 + X20/K19) + X19] V17 = 0.3 K17 = 160 [12]
v18 V18·X17·X19/[K18·(1 + X18/K16) + X19] V18 = 16 K18 = 1.46 × 105 [12]
v19 V19·X20/[K19·(1 + X19/K17) + X20] V19 = 0.27 K19 = 60 [12]