Table 1. Childhood obesity case-control association study results for FTO region markers perfectly correlated with rs9939609 in Caucasians (bold) plus all other markers present on the BeadChip in the corresponding HapMap CEU region of LD in our (a) Caucasian and (b) African American cohorts respectively.

(a) Caucasians
Chr	SNP	r2 to rs9939609	B35 location	Minor Allele	Major Allele	Aff MAF (n = 418)	Ctrl MAF (n = 2270)	OR	95% CI	P-value
16	rs9930333	0.843	52357478	T	G	0.476	0.425	1.228	1.058–1.427	0.0070
16	rs10852521	0.584	52362466	T	C	0.422	0.484	0.779	0.670–0.906	0.0011
16	rs16945088	0.099	52370025	G	A	0.094	0.090	1.056	0.818–1.365	0.68
16	rs8050136	1	52373776	A	C	0.448	0.391	1.266	1.088–1.471	0.0022
16	rs3751812	1	52375961	T	G	0.443	0.386	1.267	1.089–1.473	0.0022
16	rs12597786	0.014	52378808	T	C	0.026	0.020	1.320	0.815–2.138	0.26
16	rs9931164	0.022	52382739	G	A	0.020	0.019	1.024	0.597–1.756	0.93
16	rs9941349	0.9	52382989	T	C	0.462	0.407	1.254	1.080–1.457	0.0030
16	rs7199182	-	52383621	G	A	-	-	-	-	-
16	rs7190492	0.328	52386253	A	G	0.296	0.354	0.767	0.651–0.903	0.0014
16	rs8044769	0.62	52396636	T	C	0.414	0.483	0.758	0.652–0.881	0.00031
16	rs6499646	0.101	52401034	C	T	0.103	0.092	1.141	0.890–1.462	0.30
16	rs1421090	0.026	52407671	C	T	0.273	0.260	1.073	0.907–1.270	0.41

Minor allele frequencies (MAF), allelic test P-values, and odds ratios (OR) with 95% confidence intervals (CI) are shown for each SNP. rs7199182 has a MAF<1% in Caucasians so was not analyzed in that ethnicity. The ORs shown are for the minor allele. P-values are two-sided in each instance. r² values to rs9939609 derived from (a) CEU and (b) YRI HapMap samples are also shown.