Skip to main content
. 2008 Jan 29;9:53. doi: 10.1186/1471-2164-9-53

Table 6.

Summary of the performance of each algorithm using CGH microarray data for the Sakai sequenced strain. The sensitivity, specificity, and M-score generated from each of the cut-off algorithms from the CGH data were summarized for comparison

Algorithm M-Score Sensitivity Specificity
Naive Cut-off (0.20) 99.48 99.66 97.13
MKD*** 99.39 99.45 98.80
Mixture Model (trimodal) 99.39 99.44 98.80
Porwollik 99.13 99.07 98.76
GACK** EPP = 0 98.85 98.78 99.76
GENCOM* 98.43 98.34 99.52

* Institute of Food Research method (GENCOM)

** Genotyping Analysis by Charlie Kim method (GACK)

*** Minimum Kernel Density method (MKD)