Table 4.

Microarray and qRT-PCR results of 23 selected genes for each pair of comparison

Gene symbol	Liver vs. cecal tonsil		Liver vs. ileum		Spleen vs. ileum
	Microarray	qRT-PCR	Microarray	qRT-PCR	Microarray	qRT-PCR
IGJ	-2.6#	-4.9	0.4	-2.6	5.3 #	4.5
VLDLR	-1.5 #	-1.4	-1.4	-0.7	1.8 #	2.8
LEAP-2	3.5 #	4.5	0.6	0.0	-3.8 #	-10.1
Lb-FABP	7.8 #	12.7	7.6 #	11.7	-1.0	-0.9
TACSTD1	-3.8 #	-0.3	-3.7 #	-3.3	-5.7 #	-6.8
CYP3A37	-0.5	0.0	-0.6 *	0.2	-3.7 #	-14.6
C1QA	1.5 #	2.2	1.7 #	2.0	2.3 #	2.6
MARCO	2.1 #	2.2	2.2 #	3.5	2.8 #	6.0
BCMO1	2.6 #	3.0	0.6 *	1.0	-1.2 #	-3.8
K60	-1.7 #	-3.9	0.3 *	-0.9	1.2 #	0.7
GSTA3	-0.2	3.0	2.0 #	4.0	-1.1 *	-2.9
FIGF	-3.6 #	-2.4	-2.7 #	-1.5	-1.6 #	-0.9
CD5	-2.9 #	-3.7	-0.2	-1.4	2.9 #	2.8
GAL10	4.9 #	10.6	4.9 #	9.5	-0.1	-3.2
TF	5.2 #	9.6	5.8 #	10.6	1.5 *	3.1
VIP	-3.2 #	-5.8	-3.8 #	-6.4	-3.8 #	-4.3
CXCL14	-2.5 #	-11.1	-2.3 #	-9.2	-2.3 #	-5.9
HRSP12	2.9 #	3.6	3.2 #	3.4	-0.5	-2.6
C3	3.0 #	4.7	3.6 #	7.7	0.8 *	4.8
FABP1	7.8	3.6	7.6	0.9	-6.4 #	-8.1
TNFSF10	-1.9 #	-2.0	-1.4 #	-1.8	-2.7 #	-3.1
LCP2	-0.9	0.5	0.2	0.4	2.2 #	1.0
TIMD4	2.0 #	2.8	3.4 #	3.8	3.4 #	3.9

Note: All data are shown as log2, positive value means up regulated between tissue A vs. tissue B (tissue A – tissue B)

^#represents P value for the comparison is less than 0.0001 in microarray results.

* represents P value for the comparison is between 0.05 and 0.0001 in microarray results.

Micrroarray results shown in bold font in diagonal are the results those were used to select genes for qRT-PCR for each comparison.