Table 1.

Average ranking of 5 monoPWM models (BVH, LOD, MCH, NLG and optimized NLG (OPT)) calculated for corresponding FP rates (matrix length 15 nt).

TP rate, %	BVH	LOD	MCH	NLG	OPT
50	3.78	2.00	4.78	2.78	1.67
60	3.11	2.44	4.67	2.44	2.33
70	4.11	2.89	4.22	2.22	1.56
80	3.11	2.78	4.56	3.00	1.56
90	4.11	3.00	2.89	3.00	2.00
100	3.44	3.22	3.67	2.44	2.22

The average ranks calculated on the basis of nine TFBS types (see methods, Sequence data)