Skip to main content
. 2007 Oct 3;81(5):939–963. doi: 10.1086/521878

Table 2. .

Summary of Statistically Significant Single-SNP Results from the PDT[Note]

SNP Nucleotide
Position
SNP Name Genotype GRRa (95% CI) Z Pb
16 411873 IGR2008a_1 C/C 2.15 (1.26–3.67) 2.82 .0047
26* 435282 IGR2055a_1 G/G 2.14 (1.30–3.53) 3.00 .0027
27* 437682 IGR2060a_1 C/C 2.19 (1.31–3.65) 2.99 .0028
28* 438883 IGR2063b_1 G/G 2.21 (1.34–3.64) 3.11 .0019
34* 455246 IGR2096a_1 C/C .35 (.17–.72) −2.88 .0039
39* 506266 IGR2198a_1 G/G 2.32 (1.44–3.75) 3.46 .00055
49 522600 IGR2230a_1 T/T 2.40 (1.35–4.28) 2.96 .003
56 571022 IGR3005a_2 G/G 1.99 (1.25–3.15) 2.92 .0035
57 576586 IGR3016a_1 G/G 2.36 (1.36–4.09) 3.04 .0023
65* 582948 IGR3029a_2 G/G 2.25 (1.40–3.61) 3.37 .00076
67* 587836 IGR3039a_1 A/A 1.92 (1.21–3.06) 2.76 .0058
74* 608759 IGR3081a_1 T/T .36 (.17–.74) −2.79 .0053
78* 616241 IGR3096a_1 T/T .34 (.16–.73) −2.80 .0052
86 649061 IGR3162a_1 G/G .21 (.06–.72) −2.48 .013
90 662819 IGR3189a_2 T/T .29 (.12–.72) −2.68 .0073
91* 676688 IGRX100a_1 A/A 1.97 (1.17–3.32) 2.55 .011
92 683387 IGR3230a_1 T/T .37 (.17–.78) −2.60 .0094
93* 686249 IGR3236a_1 G/G .39 (.21–.75) −2.83 .0046
102* 877809 GENS020ex3_1 C/C .42 (.24–.73) −3.05 .0023

Note.— SNPs identified by Rioux et al.17 are shown in bold, and SNPs identified by the KWII are identified by an asterisk (*).

a

Genotype relative risk, in which the reference genotype is the heterozygote.

b

All P values are significant after correction for multiple testing with use of the method of Benjamini and Hochberg.32