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. 2008 Jan 3;8:2. doi: 10.1186/1471-2229-8-2

Table 7.

Haplotypes based on single nucleotide polymorphisms (SNPs) in the ferulate 5-hydroxylase (F5H) gene of maize and average phenotypic values of lines included in individual haplotypes. Numbers denote bp position of individual SNPs in the alignment.

5 6 11 56 65 97 610 Lines (Total = 16) NDF IVDOM DNDF
s
H_1 C G G T T C G AS12-15, 17 57.6 72.9 56.5
H_2 . . . . C . . AS16, 18, 19 58.0 72.2 56.5
H_3 G C . . . . . AS20-23 53.3 74.1 55.8
H_4 G C . . C . C AS24 51.5 77.9 61.0
H_5 . . C C C T . AS09-11 54.5 72.2 53.3

NDF: neutral detergent fiber; IVDOM: in vitro digestibility of organic matter; DNDF: digestibility of neutral detergent fiber

s: singleton