Table 1.
Perturbagens | Chromosome | Position | GFP fusion partner |
---|---|---|---|
pep1(I) | NA | NA | 15-aa peptide (internal) |
pep2(I) | NA | NA | 13-aa peptide (internal) |
pep4(C) | 12 | 345,284–345,535 | 59-aa peptide |
pep4(C) | 13 | 17,605–17,785 | 21-aa peptide |
pep5(C) | 7 | 954,846–955,084 | 31-aa peptide |
orf1 | 12 | 849,840–850,463 | amino acids 14–221 of STE11 |
orf2 | 3 | 63,438–64,244 | amino acids 32–279 of STE50 |
orf3 | 2 | 329,957–329,565 | amino acids 32–160 of GIP1 |
orf4 | 5 | 425,915–424,661 | amino acids 1512–1753 of PMD1 |
orf5 | 5 | 408,993–408,253 | amino acids 23–269 of YER124C |
orf6 | 2 | 600,538–600,774 | amino acids 11–89 of YBR186W |
orf7 | 13 | 441,164–443,186 | amino acids 653–960 of YMR086W |
orf8 | 2 | 357,343–355,292 | amino acids 934–1108 of YBR059C |
orf9 | 7 | 854,410–854,195 | amino acids 161–231 of YGR179C |
orf10 | 14/5 | 409,769–409,846/ | amino acids 477–502 of YNL115+ |
81,490–81,418 | amino acids 37–395 of RAD23 | ||
orf11 | 2 | 390,347–390,624 | 18-aa peptide + amino acids 26–98 of ECM8 |
Shown are the chromosomes from which each perturbagen-encoding sequence was derived (Chromosome), the numerical positions of the first and last nucleotides of each genomic sequence fused to GFP (Position, see ref. 8), and the predicted GFP-fused peptides comprising each perturbagen (GFP fusion partner). Sequences of the two internal peptides are as follows: pep1(I), WKYIRCIMPWHRFWF and pep2(I), RGYFNDRWYGCPG. The orf10 perturbagen is composed of tandemly ligated genomic fragments from YNL116W and RAD23 (56), both of which are required for the perturbagen to function (data not shown). The orf11 insert contains a deletion of the G residue present in the genomic sequence at position 390,403. This deletion restores the reading frame of the ECM8 gene (36).