Table 3. Synonymous Sequence Divergence (d S) between Alleles of Five Genes on the Mating-Type Chromosome in Two Lineages of N. tetrasperma.
Locus | Sequence compared (bp) | Strains | |||||
Lineage 1 | Lineage 2 | ||||||
P5811 | P505 | ||||||
P556 | P510 | ||||||
P2361 | P4460 | ||||||
AT-aT | AT-Nc | aT-Nc | AT-aT | AT-Nc | aT-Nc | ||
upr-1 | 806 | 0.0612-0.0673 | 0.044 | 0.0442-0.0503 | 0.022 | 0.056 | 0.050 |
eth-1 | 863 | 0.029 | 0.059 | 0.049 | 0.024 | 0.049 | 0.065 |
lys-4 | 607 | 0.074 | 0.029 | 0.044 | 0.021 | 0.021 | 0.014 |
ad-9 | 544 | 0.082 | 0.108 | 0.091 | 0 | 0.108 | 0.108 |
lys-3 | 731 | 0.039 | 0.051 | 0.022 | 0 | 0.028 | 0.028 |
All strains follow Fungal Genetics Stock Center (FGSC) numbers as in Table 1.
Strain P2361.
Strains P581 and P556. Comparisons between mat A and mat a component strains originating from six heterokaryotic N. tetrasperma strains (AT-aT), belonging to two phylogenetic lineages [20], and between each of the mating-type strains and the N. crassa genome sequence (AT-Nc; aT-Nc). Genes are listed from left to right on the chromosome based on gene order in N. crassa.