Table 1. General Information for the East Asian populations included in the analyses.

Ethnic Phylum	Subphylum	Code	Population name	sample size	Country	Province	County	Long.(E)	Lat.(N)
Altaic	Turkic	KAZ*	Khazaks	48	China	Xinjiang	Balikun	93.01	43.59
Altaic	Turkic	YAK	Yakut	51	Russia	Saha		124.20	62.07
Altaic	Turkic	UIG*	Uigur	48	China	Xinjiang	Turpan	88.66	42.79
Altaic	Mongolian	MVF*	Mongols	75	China	Inner Mongol	Shilingol	116.07	43.95
Altaic	Korean-Japanese	KOR	Koreans	54	S.Korea			126.57	37.32
Altaic	Korean-Japanese	JPN	Japanese	47	Japan			139.49	35.38
Sino-Tibetan	Tibeto-Burman	BQH*	BaimaDee	42	China	Sichuan	Pingwu	104.53	32.41
Sino-Tibetan	Tibeto-Burman	QMR*	Qiang	40	China	Sichuan	Mao	103.85	31.69
Sino-Tibetan	Tibeto-Burman	KHG*	Khamba Tibetan	36	China	Sichuan	Kangding	101.96	30.05
Sino-Tibetan	Tibeto-Burman	PHO*	Phunoi	43	Laos	Louang-Namtha	Louang-Namtha	101.05	21.13
Sino-Tibetan	Sinitic(Han Chinese)	WUU*	Wu Chinese	53	China	Shanghai		121.37	31.11
Sino-Tibetan	Sinitic	HKA	Hakka Chinese	41	China	Taiwan		121.05	24.20
Sino-Tibetan	Sinitic	CHT	Minnam Chinese	50	China	Taiwan		120.31	23.31
Sino-Tibetan	Sinitic	CHS	Canton Chinese	57	USA	CA	San Francisco	113.04	22.35
Hmong-Mien	Hmongic	HMQ*	Black Hmong	60	China	Guizhou	Mashan	109.80	27.88
Hmong-Mien	Hmongic	MWW*	White Hmong	60	Laos	Huapuan	XamTai	103.54	19.57
Daic	Kam-Sui	KMC*	Kam	74	China	Guangxi	Sanjiang	109.60	25.79
Daic	Kam-Sui	LBC*	Laka	98	China	Guangxi	Jinxiu	110.18	24.13
Daic	Tai-Sek	CCX*	North Zhuang	40	China	Guangxi	Wuming	108.28	23.17
Daic	Tai-Sek	CCY*	South Zhuang	30	China	Guangxi	Chongzuo	107.36	22.42
Daic	Hlai	LIC*	Hlai	59	China	Hainan	Tongzha	109.52	18.77
Daic	Tai-Sek	LAO*	Lao	117	Laos	Cap.Vientiane	Sisattanak	102.37	17.57
Daic	Tai-Sek	SKB*	Saek	57	Laos	Khammouan	Boualapha	104.55	17.28
Austro-Asiatic	North Mon-Khmer	WBM*	Ava	59	China	Yunnan	Ximeng	99.46	22.74
Austro-Asiatic	North Mon-Khmer	KJG*	Khmu	51	Laos	LouangPrabang	Nambak	102.33	20.27
Austro-Asiatic	North Mon-Khmer	LBN*	Lamet	42	Laos	Louang-Namtha	Nale	101.35	20.50
Austro-Asiatic	Viet-Muong	BGL*	Bo	52	Laos	Bolikhamxai	Khamkheut	105.09	18.08
Austro-Asiatic	East Mon-Khmer	KUF*	Katu	50	Laos	Xekong	Thateng	106.39	15.36
Austro-Asiatic	East Mon-Khmer	LBO*	Laven	47	Laos	Xekong	Thateng	106.35	15.34
Austro-Asiatic	East Mon-Khmer	CBD	Cambodians	25	Cambodia			104.55	11.33
Austronesian	Malayo-Polynesian	HUQ*	Tsat	52	China	Hainan	Sanya	109.27	18.17
Austronesian	Atayalic	ATL	Atayal	42	China	Taiwan	Yilan	121.74	24.76
Austronesian	Paiwanic	AMI	Amis	40	China	Taiwan	Hualien	121.60	23.98
Austronesian	Malayo-Polynesian	MCR	Micronesians	37	Micronesia			158.12	6.57

Note: ^*Those populations marked with stars are newly collected, and the triliteral codes are ISO639-3 codes [35]. Others are previously published populations with previously used codes [12]. San Francisco Chinese originally came from Jiangmen County, Guangdong, China; therefore, the location of CHS in the table is that of Jiangmen County.