Table 2.
Molecular Details/Characteristics of SmVAL14-28.
| SmVALa | PCR confirmationb | S. mansoni v4 IDc | Protein size (AA)d | Gene length (bp)e | Signal peptidef | Conserved intron phaseg | Gp1/2h |
| 14 | Yes | smp_078490 | 219 | 1514 | Yes | 0/2/0/2 | 1 |
| 15 | Yes | smp_070250 | 270 | 4387 | No** | 0/2/0/2 | 1 |
| 16 | Yes | smp_124070 | 169 | 25196 | No | 1/1 | 2 |
| 17 | No | smp_163400 | 168 | 13461 | No | 1/1 | 2 |
| 18 | Yes | smp_001890 | 194 | 7900 | Yes | 0/2/0/2 | 1 |
| 19 | Yes | smp_123090 | 186 | 7381 | Yes | 0/2/0/2 | 1 |
| 20 | Yes | smp_127130 | 225 | 9235 | Yes | 0/2/0/2 | 1 |
| 21 | Yes | smp_159290 | 234 | 1582 | Yes | 0/2/0/2 | 1 |
| 22 | Yes | smp_139450 | 219 | 1505 | Yes | 0/2/0/2 | 1 |
| 23 | Yes | smp_160250 | 200 | 1182 | Yes | 0/2/0/2 | 1 |
| 24 | No | smp_141550 | 195 | 1189 | Yes | 0/2/0/2 | 1 |
| 25 | No | smp_141560 | 195 | 1189 | Yes | 0/2/0/2 | 1 |
| 26 | Yes | smp_154260 | 182 | 2727 | Yes | 0/2/0/2 | 1 |
| 27 | Yes | smp_154290 | 182 | 2696 | Yes | 0/2/0/2 | 1 |
| 28 | No | smp_176160 | 182 | 2713 | Yes | 0/2/0/2 | 1 |
| Genesi encoding incomplete SCP/TAPS domains : smp_120670, smp_116210, smp_176170, smp_035980, smp_159280, smp_100560, smp_118160 | |||||||
(a) Gene names (b) Successful PCR amplification of SmVAL fragment from parasite cDNA (c) Schisto GeneDB version 4 systematic ID (d) Protein size (in amino acids) encoded by open reading frame (e) Gene length (in base pairs) derived from Schisto GeneDB assembly 4 (f) Signal peptide prediction with SignalP 3.0 server (D-score > 0.43 = yes) double asterisk represents SmVALs with D-scores above 0.38 but below 0.43 (g) Conserved Intron Phase derived from Schisto GeneDB assembly 4 (h) Group 1/Group 2 designation. (i) Schisto GeneDB version 4 systematic ID of predicted genes encoding incomplete SCP/TAPS domains are also listed.