Table 3.
Level of synonymous substitution (Ks) between homologous sequences in M. acuminata and M. balbisiana.
Locus | Length | Ks | Predicted function |
L4 | 1065 | 0.0496 | GDSL-motif lipase/hydrolase family protein |
L5 | 1401 | 0.0311 | protein kinase family protein |
L7 | 1341 | 0.0318 | hypothetical protein |
L9 | 1647 | 0.0252 | protein kinase family protein |
L11 | 825 | 0.0323 | protein kinase-related |
L13 | 2901 | 0.0420 | leucine-rich repeat-containing protein kinase family protein |
L15 | 1140 | 0.0435 | gibberellin 20-oxidase family protein |
L16 | 1899 | 0.0342 | glucose-inhibited division A family protein |
L18 * | 1371 | 0.0960 | leucine rich repeat family protein |
L20 | 4119 | 0.0231 | transcriptional repressor protein-related |
L23 | 1941 | 0.0369 | protein kinase family protein |
L24 | 1737 | 0.0413 | exostosin family protein |
L26 | 2145 | 0.0461 | kinesin light chain-related |
Ks mean | 23532 | 0.0410 | |
Concatenation Ks | 23532 | 0.0349 |
* Alignments between the M. acuminata gene and the orthologous sequence on the M. balbisiana sequence were identified by BLAST