Table 3.
Functional categories | Number of features | ||||
AGPS | PSoL | one-class SVMs | two-class SVMs | two-class SVMs_balanced | |
01 metabolism | 295 | 110 | 10 | 10 | 10 |
02 energy | 115 | 210 | 10 | 60 | 145 |
10 cell cycle and DNA processing | 175 | 160 | 10 | 10 | 10 |
11 transcription | 280 | 210 | 10 | 260 | 10 |
12 protein synthesis | 25 | 160 | 260 | 260 | 10 |
14 protein fate | 160 | 160 | 10 | 10 | 295 |
20 cellular transport | 190 | 260 | 10 | 60 | 10 |
30 cellular communication | 70 | 160 | 10 | 110 | 70 |
32 cell rescue, defense and virulence | 295 | 160 | 10 | 110 | 250 |
34 interaction with the environment | 85 | 210 | 10 | 10 | 295 |
40 cell fate | 55 | 260 | 10 | 10 | 100 |
42 biogenesis of cellular components | 25 | 260 | 10 | 10 | 190 |
43 cell type differentiation | 40 | 210 | 10 | 10 | 40 |